[Mon Aug 29 17:47:22 2016] >Input file: TMB3R888M7G.pdb >TM segments: 67-77_ 88-97_ 101-108 MAIDEN score = 11.4914 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L74 -A91 10 L74 -P92 1.90089535846197 L74 -V90 0.944470163667056 F69 -V90 0.880382525174298 H73 -P92 0.790386071586092 E68 -V90 0.751535290156646 L74 -R93 0.59959053238404 H73 -V90 0.518586672014232 D70 -A91 0.489747333146248 Y71 -A91 0.44831717370851 H73 -R93 0.375085938121194 E68 -E94 0.304138063615457 E68 -P92 0.299688191490008 I72 -R89 0.299556265851283 I72 -V90 0.289290705177768 E68 -R93 0.267137332688955 F69 -A91 0.260041328195225 D70 -D105 0.247873653659384 I72 -A91 0.247684464829772 H73 -R89 0.226748199791178 D70 -R76 0.224514859976702 Y71 -R76 0.221409227855589 E68 -V103 0.220421566320664 D70 -R93 0.202170663277761 R89 -D105 0.175902806787934 D70 -R89 0.169388888415487 V90 -V101 0.14933700132436 L74 -W88 0.145945590488179 V103 -L108 0.129160371424054 E68 -S95 0.128408885767194 E68 -A91 0.123887567124659 L74 -S95 0.110806688528863 A91 -V101 0.108279432836665 H73 -S95 0.107313440933792 Y77 -W88 0.104475825662156 S95 -L102 0.0986790207864656 I72 -P92 0.0964606504760326 I72 -R93 0.0949036052931289 H73 -W88 0.0941599452682972 F69 -R76 0.089559571851979 E68 -D105 0.0867103289154303 L67 -V96 0.0857074911446047 E68 -L102 0.0831734888848881 S75 -A91 0.0744056609261261 L67 -A91 0.0682538993813484 R76 -E94 0.0672877556627096 S75 -V90 0.0658701899510135 Y77 -A91 0.0655352550988018 L67 -V90 0.0597037148060275 S75 -V96 0.0585305193240697 Y71 -R89 0.0524491181676074 E68 -V96 0.0494697082293789 Y71 -E94 0.0493470808473955 W88 -V103 0.0483857162150096 D70 -S95 0.0437719109698831 R89 -S95 0.0430339084781908 S95 -V103 0.0419429618039215 P92 -K97 0.0402847089219716 Y77 -P92 0.0382583931679736 F69 -V103 0.0330665643064076 E68 -R89 0.0329238185179168 L102 -I107 0.0328078356788621 V96 -V103 0.0325898490001215 F69 -P92 0.0302876407284716 F69 -L104 0.028620032954727 E94 -L102 0.0234294448568049 F69 -E94 0.021891238504411 F69 -R93 0.0198109668302052 W88 -E94 0.0171480229885135 E94 -V103 0.0101662160070024 R89 -E94 0.00897388259214615 F69 -D106 0.00637166089753549 S75 -E94 0.00628257525330456 V96 -L102 0.00554832390281135 F69 -L102 0.00553678477558428 L74 -E94 0.00469418366798102 E68 -L104 0.00181731221943426 L102 -L108 0.000801834494501108 L74 -V96 -0.000811959131008066 F69 -S75 -0.00164693796343096 V90 -S95 -0.00696879129568373 D70 -S75 -0.0089379565258878 L67 -D105 -0.010172601122342 R76 -A91 -0.0179470349195472 F69 -V101 -0.0210571050901009 E94 -V101 -0.0224592282808462 E68 -K97 -0.0324855832769529 E68 -W88 -0.034802891067252 I72 -W88 -0.0464430225600516 Y71 -S95 -0.0482990813714692 S95 -V101 -0.0500290532012457 R76 -S95 -0.0524591470006819 A91 -V103 -0.0526831051892822 L67 -I72 -0.0553330903996407 W88 -D105 -0.0564571168616022 E68 -V101 -0.0571479915599431 E68 -H73 -0.057279691304279 S75 -S95 -0.0578406425316524 R76 -R93 -0.0599535364909489 S75 -W88 -0.0665722921599787 E68 -L74 -0.0764735885280614 D70 -W88 -0.0765145039728212 A91 -K97 -0.0844569458087898 Y71 -P92 -0.0852806072211122 E68 -R76 -0.0884694798509154 I72 -S95 -0.08882330346892 V90 -V96 -0.0912556975859571 S75 -K97 -0.0913836687990845 A91 -V96 -0.0924592355221474 S75 -R93 -0.0925937473768058 F69 -D105 -0.09634738086987 L67 -R93 -0.0988494651613667 V90 -V103 -0.0998610080296018 V90 -L104 -0.104751500780672 V90 -L102 -0.110661028042575 E68 -S75 -0.110715306843483 R89 -V103 -0.117611501205297 D70 -E94 -0.120961704453269 L67 -E94 -0.127035858377616 F69 -R89 -0.13090492019964 W88 -L104 -0.133795187954834 L67 -R89 -0.134014706393793 D70 -Y77 -0.135451336060109 F69 -V96 -0.138085463285378 L67 -P92 -0.138559524778237 R76 -V90 -0.140793140855959 Y71 -R93 -0.149856939843164 Y71 -W88 -0.150722927203193 H73 -E94 -0.15367946356074 Y77 -V90 -0.159956225956813 D70 -V103 -0.160960750450209 F69 -Y77 -0.16551023357492 D70 -L104 -0.169785054369262 F69 -S95 -0.174290895082334 D70 -P92 -0.181765925150214 V90 -K97 -0.182088137327186 R76 -R89 -0.187011117309865 F69 -L74 -0.18947935001161 L67 -L104 -0.191537776091748 H73 -A91 -0.204243839367646 K97 -L102 -0.206530163094054 V90 -D105 -0.209981425237608 Y71 -V90 -0.210636737159575 L67 -V103 -0.216200587577814 F69 -W88 -0.216445942923444 R93 -V101 -0.220691663433358 I72 -E94 -0.220697050103929 R76 -W88 -0.25613056754537 E68 -D106 -0.266233067087785 L67 -S95 -0.293435400053939 V96 -V101 -0.347439626289446 R76 -P92 -0.37099963290326 L67 -V101 -0.398454334241479 L67 -L102 -0.432997107793657 L74 -R89 -0.493548713904232 S75 -R89 -0.530509907788468 Y77 -R89 -0.636106343584947 S75 -P92 -0.644912935815328 D70 -V90 -0.673054397326228