[Fri Aug 26 18:08:41 2016] >Input file: TMB4SIG8M2D.pdb >TM segments: 324-338_ 388-396 MAIDEN score = 0.2985 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D324 -V329 0.540837923092512 G326 -H333 0.220194812004085 H325 -G331 0.218916199148476 H325 -H333 0.206422368259478 H325 -I330 0.205112466460152 H325 -E395 0.197538219644728 H391 -G396 0.17432342419461 D324 -G331 0.164053588338955 H325 -V332 0.116157132095338 E336 -G394 0.0693882342807943 T334 -F393 0.0645925550011659 L327 -V332 0.0620966451088618 T334 -Q392 0.0404359154967497 H325 -G396 0.0331073388577412 V329 -R389 0.0314234133718884 I330 -R389 0.0222049584745441 E336 -F393 0.0169180465103085 G326 -G331 0.0113376909294964 P335 -F393 0.00774257807335599 G390 -E395 0.00695936525733143 D324 -I330 0.0018834495317317 E336 -Q392 -0.00184615510639752 V332 -A338 -0.0183538916009782 V329 -I388 -0.025753998992845 I388 -F393 -0.036205276603706 V332 -F337 -0.0387604059577322 P335 -G394 -0.053259644693231 G331 -I388 -0.0730642570513389 V329 -G390 -0.0987091526586079 V332 -I388 -0.107948168477867 T334 -H391 -0.113654304571898 H333 -A338 -0.121569895823056 I330 -I388 -0.157394974958995 G326 -V332 -0.197346935975292 V328 -R389 -0.252504796414527 D324 -V332 -0.267932927065375 H333 -Q392 -0.548825736106132