[Fri Aug 26 18:10:01 2016] >Input file: TMB4V8P7M1D.pdb >TM segments: 85-101 MAIDEN score = -6.9916 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V95 -R100 0.42991160149413 A89 -S97 0.191953789526074 A89 -G96 0.147855339454201 P93 -A101 0.117207685386055 C91 -R100 0.1104331298346 V92 -A101 0.101091487446259 V92 -R100 0.0615262486362744 A86 -S94 0.0169256211316062 V92 -S97 0.0052911425187645 G90 -S97 0.00401233325238515 G90 -M98 0.000257647954033047 A86 -V95 -0.0190901399873518 P93 -R100 -0.0257348328731482 A86 -P93 -0.0321207381268502 V88 -G96 -0.043928587426092 S94 -V99 -0.0474100091817273 V87 -G96 -0.0501218183843823 A89 -M98 -0.0578812450545318 F85 -V92 -0.0611639342376851 S94 -A101 -0.0737452293695906 F85 -S94 -0.0799750488673627 P93 -V99 -0.0816240783300746 S94 -R100 -0.0856454949838053 V87 -V95 -0.0861494092678414 V88 -S97 -0.09005082540814 G90 -V99 -0.0964361687567057 C91 -V99 -0.101439501858922 P93 -M98 -0.112477971480684 F85 -P93 -0.116627410860783 G90 -G96 -0.176262435529777 A89 -S94 -0.19981329425797 V87 -P93 -0.21859227959928 C91 -G96 -0.237931204406325 G90 -V95 -0.239411183018444 F85 -G90 -0.242567688197165 V87 -V92 -0.245668212282148 C91 -M98 -0.247789598169244 V88 -P93 -0.273469312402492 V87 -S94 -0.285697823640748 V88 -S94 -0.290812201877009 A86 -V92 -0.29389634114974 V92 -M98 -0.318770846881831 V92 -V99 -0.338359071884519 V88 -V95 -0.351857215345634 V95 -A101 -0.366991074551752 A89 -V95 -0.369203408273324 A86 -C91 -0.369974059010285 G96 -A101 -0.476123020734457 C91 -S97 -0.562368641549882 F85 -C91 -0.810881552641621