[Mon Aug 29 18:02:06 2016] >Input file: TMB5GV78M1G.pdb >TM segments: 76-125 MAIDEN score = 36.5499 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P83 -G115 10 R80 -V91 10 P83 -L116 1.99592164566362 L113 -P120 1.85948036106037 V81 -A111 1.77232128932182 V81 -V91 1.27183520174124 P83 -A90 1.01827771755942 V112 -C124 0.870618788739517 V79 -F93 0.86370626242029 L96 -S108 0.803888766311597 A114 -P119 0.799987557543782 L113 -C124 0.760081031718741 R80 -F93 0.756006919995476 V81 -F93 0.737765532023408 V112 -L125 0.732263933835278 L113 -P119 0.680726804129954 R80 -A90 0.648665392949999 V91 -L113 0.647044511416576 V79 -A95 0.631000591674197 R80 -A114 0.62798029273176 R80 -S89 0.596986173168718 L96 -A106 0.563084169002345 V81 -G92 0.55417013368115 V81 -A110 0.516575283104157 A114 -P120 0.508708279238501 V81 -L113 0.503313665333452 V97 -A109 0.500096136450849 F93 -A110 0.499296304130967 V81 -A90 0.473461783930206 R80 -L94 0.424882396008277 P120 -L125 0.419714282676703 V79 -G115 0.418635537141853 V112 -L121 0.41616845886716 V84 -G115 0.415638044228503 V79 -A90 0.388660474050018 R80 -L113 0.387677527074489 V81 -G115 0.357479743288775 A90 -L116 0.356208908501319 L82 -V91 0.341461444606354 V91 -C124 0.329733338026785 L94 -A110 0.316627703703869 V81 -V112 0.313499682783506 V81 -A114 0.299524569546737 A86 -G115 0.299223136220083 L82 -L116 0.296504576218657 P83 -V91 0.286359143865127 G92 -L125 0.282680955711596 R80 -L116 0.28040704611851 V79 -L94 0.279814713064454 V84 -L116 0.268785783688036 Q78 -V84 0.265400413541844 A111 -S118 0.265289500480481 V91 -L116 0.263304792872493 S85 -L116 0.259286094905354 G77 -G115 0.254045853377157 L82 -L113 0.253813838453023 L82 -A114 0.249579634914038 G77 -L96 0.238391956639378 A110 -G115 0.237820580070817 Q78 -G92 0.233350251550732 L82 -A111 0.232429023689197 L113 -P123 0.229326146281148 S85 -A114 0.226269863610858 L113 -S118 0.223477876966589 V79 -V91 0.222706362609581 P83 -F117 0.220367571468452 F76 -A109 0.220288174403164 L94 -A109 0.219739534862411 L94 -S108 0.217539571077646 I88 -G115 0.18750407637576 Q78 -S85 0.187086163417476 V79 -I88 0.184081908263204 F93 -V112 0.175953027046185 L94 -V112 0.17581415654114 P119 -C124 0.173805857782726 D101 -A107 0.173569177371509 G92 -L113 0.173296610133236 L116 -C124 0.171720200962892 G100 -A105 0.170094055522009 Q78 -P83 0.170023659832009 G115 -L125 0.169579869690491 R80 -S85 0.167180509406522 R80 -I88 0.163382646492462 A111 -E122 0.163240957033031 S103 -S108 0.162115803351977 G87 -A114 0.161636831452177 L94 -C124 0.154465323038471 L96 -A109 0.154285414964775 L82 -P119 0.151408951507074 V112 -E122 0.150577675634847 F93 -S118 0.144186549569068 S89 -L116 0.142373176146375 G92 -A110 0.140119428764237 G77 -G98 0.139500142521976 P83 -P120 0.137746725582017 F93 -C124 0.137663819653192 R80 -P119 0.133686119053399 V81 -S108 0.13286566212803 S89 -C124 0.131369106732813 A90 -A114 0.130834126234616 V79 -L113 0.129600669646623 V81 -V97 0.128324435297851 V79 -V97 0.128215338488987 G102 -A109 0.127861042462522 R80 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0.0242872123943223 L82 -G87 0.0239485883566779 A86 -F117 0.0237174672183555 G77 -A111 0.0227143630122457 Q78 -L96 0.0225883115728225 F93 -L116 0.0212695320582679 V81 -S89 0.0210323644851638 G87 -F117 0.0187682679850614 F76 -S108 0.0178098904051363 A99 -V104 0.0167412047773343 A90 -P119 0.0164918124121964 F93 -P119 0.015744864443735 R80 -P123 0.0147736651498276 S89 -S118 0.0147339752777702 G115 -P123 0.0131130136720663 V97 -A111 0.0130673716965184 V91 -L96 0.0120842765601283 A90 -A110 0.0117895170370401 A95 -G115 0.0113341173977404 S85 -S118 0.0106480886638108 A95 -V112 0.0102009815235919 V79 -A111 0.0101535404119382 G77 -A109 0.00944697332164957 G77 -A110 0.00688591045608899 Q78 -A110 0.00595617870098053 S89 -P120 0.00573378466024366 Q78 -A109 0.00531442501256318 G77 -A114 0.00478222750775048 A107 -V112 0.00395653064559909 G92 -L116 0.0036272377708535 S89 -V112 0.00244623053620785 G77 -A90 0.00169591292294768 P119 -L125 0.00115411787642472 F76 -L96 0.000763951191048662 V112 -P120 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