[Fri Aug 26 18:18:08 2016] >Input file: TMB5I538M1D.pdb >TM segments: 370-390 MAIDEN score = -0.8805 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L381 -R386 1.19568371191858 L382 -V387 1.00241754255608 L381 -V387 0.609088403677476 V380 -R386 0.418705825652932 A383 -L388 0.405912935176903 L382 -L388 0.337373797666738 V380 -V387 0.28221502950383 S377 -G385 0.251649158717075 L378 -G385 0.229819730925084 V379 -G385 0.165596955580741 G371 -L378 0.163308641963121 V376 -V387 0.142543080590702 V372 -L378 0.126504777708162 V372 -S377 0.124176188105478 L378 -L388 0.11701065504218 S377 -V387 0.116204696768595 G374 -T384 0.113372114247231 L378 -A389 0.112715201892086 L378 -A390 0.0916574995384511 A383 -A390 0.0881899553661309 V380 -A389 0.0876706969635519 V376 -T384 0.073677220550274 V372 -R386 0.065975477314006 L381 -A390 0.0603138598059321 G375 -L382 0.0600795879126604 V372 -G385 0.049875335783347 A373 -V380 0.0492051400376079 V372 -L382 0.0472115204833994 G371 -L381 0.0464969133572199 V380 -A390 0.0439055183013792 A373 -L382 0.0262616031646878 A373 -T384 0.0254370720138195 S377 -R386 0.0123077895786103 V376 -A383 0.00945290634677665 A373 -V379 0.00872864081836877 V376 -G385 0.00333295479027029 G375 -T384 0.00134735394843077 V372 -T384 0.000349834773320734 V379 -A389 -0.00218080239167584 G375 -R386 -0.00603046965074938 V379 -T384 -0.0180567978580415 V376 -R386 -0.0205818944635094 G374 -L381 -0.0241998826427476 G374 -R386 -0.0312086285275548 G374 -L382 -0.0352779644238537 G371 -V376 -0.0376554385608303 G375 -A383 -0.0377831829465949 G371 -V380 -0.0463133675117255 L378 -T384 -0.0771967170292118 P370 -G375 -0.0794288969362318 A373 -L381 -0.08292824729262 V372 -V379 -0.0838371007234247 A373 -R386 -0.0888135741309548 G375 -V380 -0.104376049421059 L378 -R386 -0.104935957846775 G375 -L381 -0.121903682996642 G374 -V380 -0.123181867928645 L378 -A383 -0.13133341890757 A373 -L378 -0.147156220183483 P370 -S377 -0.149618919360021 T384 -A390 -0.151805415865322 V379 -R386 -0.15182327534942 G371 -S377 -0.153704160158242 L381 -A389 -0.164419263469289 G374 -V379 -0.16881143970912 A383 -A389 -0.181696607632973 S377 -L388 -0.190801202289608 S377 -A383 -0.197256243535176 V379 -L388 -0.213567649290264 V376 -L382 -0.222323735067633 V372 -L381 -0.2312837354966 S377 -T384 -0.233942220589108 V380 -G385 -0.234301187109563 V372 -V380 -0.283222280736607 V380 -L388 -0.287435440929732 L378 -V387 -0.291078253127534 S377 -L382 -0.291832112998618 L382 -A389 -0.304838353754011 L382 -A390 -0.312326783948208 T384 -A389 -0.332926206606853 L381 -L388 -0.338287452212676 V379 -V387 -0.340535701670288 V376 -L381 -0.353708516164097 G385 -A390 -0.460327749502027