[Mon Aug 29 18:05:10 2016] >Input file: TMB5I6F3M1G.pdb >TM segments: 309-329 MAIDEN score = -9.1014 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W309 -T314 0.411248868328492 H313 -P320 0.248957025233511 A323 -A329 0.229665354736079 P320 -S328 0.191787956084058 H313 -F318 0.169207957310807 A311 -L316 0.16239345538437 L316 -A321 0.149665378323785 A321 -A329 0.131862054814591 T314 -G322 0.12937889859088 T314 -P320 0.119775626688535 W309 -F318 0.116298336788306 A311 -A321 0.0517494414402844 A311 -L319 0.0499719851364473 H313 -A321 0.0336233945303799 H313 -G322 0.0291409279669841 P320 -A329 0.0279253685829732 A315 -A323 0.0117953580045306 G322 -A329 0.011047864795386 L324 -A329 -0.0098033768743746 A317 -V325 -0.0200466246232747 L312 -P320 -0.0211172665232855 F318 -A326 -0.0364568537544034 T314 -A323 -0.0416096289141277 A311 -P320 -0.0577543470749644 S310 -F318 -0.0624757639493067 A311 -F318 -0.0674209358483173 A317 -A326 -0.068160459646101 A315 -G322 -0.0952112078546741 P320 -V325 -0.0983997151548675 W309 -A315 -0.101799999329162 L316 -V325 -0.105181526767841 P320 -A326 -0.105762491636312 S310 -L319 -0.108437767828125 A315 -L324 -0.109344109268377 G322 -S328 -0.116666142969638 F318 -L327 -0.129254314726198 H313 -L319 -0.136110122815667 T314 -A321 -0.148467100714681 L312 -A321 -0.149998356236141 W309 -A317 -0.167530198704852 L319 -S328 -0.181708207782218 L312 -L319 -0.191426426867439 L316 -L324 -0.191565081340551 W309 -L319 -0.199318342679187 A321 -S328 -0.200895351283802 S310 -A315 -0.201725412552817 S310 -A317 -0.2034256747917 A317 -A323 -0.209647898596896 L319 -L327 -0.211328603129631 L312 -F318 -0.231290223265894 A315 -A321 -0.233570341118221 L319 -V325 -0.240747143217405 A317 -L324 -0.240835793383809 A311 -A317 -0.241539246474308 F318 -V325 -0.251078371724438 L319 -A326 -0.256194712875478 F318 -L324 -0.273631009744655 L316 -A323 -0.276369992737169 L312 -A317 -0.287864765696773 A321 -L327 -0.303033340245398 W309 -L316 -0.310920510029435 G322 -L327 -0.314039823850059 T314 -L319 -0.323977691022711 S310 -L316 -0.326589953367066 L316 -G322 -0.341699781279006 L319 -L324 -0.39633864423126 A321 -A326 -0.418714389366141 A315 -P320 -0.433339225965232 F318 -A323 -0.446634735652232 A323 -S328 -0.454967609394901 A317 -G322 -0.473819506021732 P320 -L327 -0.55160247803967