[Mon Aug 29 18:05:30 2016] >Input file: TMB5JM91M1G.pdb >TM segments: 684-723 MAIDEN score = 18.7258 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P701 -Q719 10 I688 -A693 1.98628384897911 V687 -A693 1.87041663813361 L702 -P718 1.83053433238141 Y706 -E713 0.98702018279794 L704 -E713 0.926225019985003 L702 -L717 0.863840945004419 L704 -L717 0.845902144179135 L704 -V716 0.804735955060353 V687 -L692 0.789062941746936 L704 -K715 0.771948479458766 V700 -Q719 0.741889515301666 V687 -K694 0.678130661630009 K690 -Y695 0.669809493047997 Y695 -V716 0.546889249917972 Y703 -V720 0.543942171956066 I688 -Y695 0.522304011555081 L705 -V716 0.461555443229224 K709 -P714 0.437998875967139 R697 -P718 0.435152127161658 K684 -K690 0.422974085656524 R697 -L702 0.422889951780386 L702 -V716 0.411524228852046 A686 -A693 0.411247419594171 T689 -S698 0.396537585871941 Y706 -K715 0.380497448821483 I688 -G696 0.365047431245515 Y695 -Q719 0.355561254792942 D707 -E713 0.351920016720022 A686 -L692 0.346818259300884 L702 -V720 0.34650415808969 P701 -P723 0.343151407298138 D685 -R697 0.341620462157313 Y706 -P714 0.33599216876701 D707 -V716 0.333086988748118 L705 -P714 0.32851563341533 G696 -Y703 0.326391866240062 Y703 -Q719 0.312509524912406 Y703 -P723 0.303968764959052 P701 -V720 0.30019244092071 T689 -Q719 0.246638922428546 D685 -A693 0.244349436740329 Y703 -P718 0.231222201775266 R697 -K715 0.227909491403452 L704 -G711 0.224547457917108 L705 -P718 0.217235855505521 D685 -A691 0.205669472411798 S699 -P718 0.196102627102332 P718 -P723 0.194053829404393 S698 -Y703 0.185549468577653 Y703 -S722 0.177755395194954 D685 -P701 0.173362285495832 K694 -S699 0.17181126807847 A693 -V716 0.164042927386519 L717 -S722 0.161955719632102 T689 -P701 0.151956980576363 K694 -L702 0.132885617961213 L704 -L721 0.128755385245916 Y695 -G711 0.124622220212375 S699 -Q719 0.124538251037771 P701 -S722 0.118553446058327 Y706 -P718 0.116869902745199 L704 -V720 0.113280204991808 S698 -V716 0.112828750225905 A693 -L717 0.109929432080708 V687 -V700 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