[Mon Aug 29 18:09:31 2016] >Input file: TMB6CZ46M1G.pdb >TM segments: 135-168 MAIDEN score = 8.0587 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C139 -R163 10 L141 -L165 1.26683235589888 L143 -V167 1.2113345977329 A138 -P159 1.00706656897455 E142 -L164 0.955867351166069 V140 -L164 0.76438846027261 T151 -T166 0.723215665957655 L141 -L164 0.688534291205383 C139 -L165 0.673352175217222 P137 -L158 0.66398680885823 L143 -E168 0.612587456383007 V140 -L165 0.564900757168929 C139 -L164 0.53648619702685 C139 -L158 0.476271621594504 A155 -R163 0.442432727762363 T151 -E168 0.437140480733958 P137 -G162 0.399122661793175 C139 -T151 0.362947638119817 Y149 -V167 0.356180304507946 A155 -L164 0.355915384220726 P137 -E142 0.348195852562956 L158 -R163 0.334880452780546 T145 -S150 0.324385950421677 A138 -G161 0.324101835940018 A138 -L158 0.290434566832207 L141 -T166 0.290156311056279 L141 -R163 0.290002402703373 G148 -L165 0.287342726089389 L141 -G162 0.28649212892733 G148 -L164 0.285878329591572 A136 -L158 0.279062147824182 T145 -T166 0.278170972148812 A155 -G161 0.273996203985246 T151 -L164 0.270673615640629 A138 -L164 0.26570146715787 K135 -A155 0.239495090564303 C139 -P160 0.231870506150884 G144 -T166 0.224779707667894 S150 -A157 0.224469670308082 G148 -Q156 0.20374048654186 P137 -Q156 0.198980210202346 Q156 -G161 0.187870982647532 A138 -I154 0.185463977546616 A136 -I154 0.183649413391712 L141 -V167 0.177756631692525 Y149 -E168 0.175700146878105 P137 -P159 0.174856515429891 T151 -L165 0.162041413449489 L141 -G148 0.156338791687577 L153 -P159 0.147270993740037 Y146 -L165 0.145111624060387 Y146 -L153 0.14191769817562 A136 -R163 0.141267600126815 E142 -V167 0.138714060866084 L153 -L165 0.133990868625897 Y149 -L164 0.132022030802535 E142 -T151 0.129175148995328 L143 -L152 0.121795684647698 A136 -G161 0.120274929198805 S150 -L164 0.11593867160897 V140 -S150 0.109212374746238 V140 -P160 0.108829566133436 C139 -Q156 0.105829435722669 T151 -L158 0.101660327571459 Y146 -L152 0.101270140014162 L141 -L153 0.100744029143643 A136 -L164 0.0975009639294737 A136 -A155 0.0974050840389502 G144 -A155 0.0973595434574079 L141 -S150 0.0942910714276586 P137 -P160 0.09425011568187 K135 -G162 0.0938281761948333 P159 -L164 0.0916555779061596 L143 -L153 0.0914845083255389 C139 -A157 0.0901906681049542 A138 -L152 0.0895025970108296 L152 -L165 0.0892277680306144 G144 -L152 0.088519101344537 L141 -Q156 0.0870193982688114 L153 -R163 0.0819446578712887 V140 -G148 0.0772111850312425 L143 -T166 0.0747565187529826 L143 -Y149 0.0727184128615823 E142 -Y149 0.0719277693524319 Y146 -I154 0.0709341914016344 T151 -R163 0.0705947428148752 G148 -A157 0.0685655112793362 P160 -L165 0.0678047441571952 C147 -L153 0.0676565563678384 T145 -L164 0.0675094318684106 A136 -L141 0.0663214574753655 T151 -G162 0.0659705934666679 L141 -A157 0.0658779725033657 A136 -Q156 0.0653771763038429 K135 -L141 0.0628695277633473 P137 -L152 0.0537178937423528 L153 -G162 0.0494972546919401 G144 -I154 0.0494598235922972 P137 -L153 0.0478375584507056 A136 -P160 0.0471526086073801 A138 -L165 0.0466061649941416 S150 -V167 0.0447976884511294 L141 -L152 0.0371502971450157 S150 -L165 0.0348948467678993 C147 -T166 0.0348362213539808 Y149 -Q156 0.0339542049948429 I154 -L164 0.0333820347082838 V140 -Q156 0.0314585843949682 V140 -P159 0.0273144459743064 I154 -P160 0.0182252695297183 Q156 -R163 0.0178959681352695 E142 -G162 0.0164291405969721 L152 -G162 0.0142201268476381 P137 -G161 0.0140244217062424 C147 -A155 0.0116594280694664 G144 -L164 0.0109346997759339 L152 -P160 0.00874861936709692 E142 -L152 0.00710390321403764 Y149 -A157 0.00357632903977922 V140 -V167 0.003556361796339 Y146 -E168 -0.000192945014114265 L141 -G161 -0.000820974355887016 K135 -E142 -0.0014902731246087 T145 -L165 -0.00490740267735212 L158 -L165 -0.00601711536823935 C139 -T166 -0.0104902349417806 C147 -L164 -0.011767277767178 K135 -I154 -0.013968510395252 L152 -P159 -0.0150334317069563 E142 -R163 -0.0207213408970024 P159 -L165 -0.0208182818236136 T145 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P137 -L165 -0.112064222850105 S150 -E168 -0.113268633553684 Y149 -A155 -0.113373954676402 V140 -T166 -0.113565265039979 L143 -G148 -0.116443459050886 E142 -E168 -0.117046505382256 A155 -P160 -0.11955924956479 G148 -V167 -0.119896337274545 I154 -T166 -0.123374845952999 G148 -E168 -0.127929629416511 E142 -G148 -0.129228102271222 P137 -A155 -0.134369566525125 T145 -L153 -0.138180687520186 G144 -L165 -0.13844430716839 C139 -I154 -0.139062629066001 G148 -R163 -0.139520738334944 T151 -Q156 -0.140577842982329 K135 -P159 -0.140906238623596 A136 -L153 -0.140977988338445 E142 -S150 -0.141902771773014 C139 -A155 -0.146831713357347 L143 -R163 -0.151414764478466 V140 -A157 -0.153566199204444 P137 -T151 -0.154392187804545 G144 -Y149 -0.159296176492674 L152 -E168 -0.160327578600151 L141 -T151 -0.165513973098539 Y146 -V167 -0.169197123997401 V140 -T151 -0.171443734180886 V140 -L152 -0.172437742644076 T145 -I154 -0.173766481558759 C147 -L152 -0.17399258589983 V140 -I154 -0.177480144436508 K135 -L164 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