[Fri Aug 26 18:23:28 2016] >Input file: TMB6JAS7M1D.pdb >TM segments: 53-73 MAIDEN score = -3.8968 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P59 -A64 0.383691110456754 I67 -G72 0.311176322888179 A64 -G72 0.225121492429722 F60 -V65 0.198544323947247 E56 -A62 0.196107848327378 A62 -T70 0.184183393065002 F60 -A68 0.160903455736999 I66 -Q71 0.127971615949431 V65 -V73 0.113980484847459 N53 -P59 0.108442181267429 N57 -A64 0.106874869768128 A63 -G72 0.104661903222721 A54 -A62 0.10067816024198 A62 -V69 0.0916254299807954 F61 -T70 0.0573785495029002 A63 -Q71 0.0525284228150111 A64 -V73 0.044281510850527 V65 -T70 0.0440654250845478 P59 -I67 0.037865732257639 Y55 -A62 0.0370115422592772 F60 -T70 0.0313850659731942 A54 -A63 0.0278850546468536 P59 -A68 -0.00513078149149759 N57 -V65 -0.00870420137688943 N53 -F58 -0.00963246903558251 F58 -I66 -0.0108212790994138 I66 -V73 -0.0180790979845167 F61 -V69 -0.0218388180441 P59 -V65 -0.0231827981843855 A64 -Q71 -0.0310945342388562 Y55 -A64 -0.0437463198914849 N53 -F61 -0.0486672769854728 Y55 -A63 -0.0538835840118059 N57 -A63 -0.0541101427475887 E56 -A64 -0.0656000660646741 E56 -A63 -0.0667971870859305 F60 -I66 -0.0930817988181758 F58 -V65 -0.0935135089630155 A54 -F61 -0.100522180566142 F61 -A68 -0.103042683316304 A54 -P59 -0.112915987816041 F60 -V69 -0.114405766051687 A54 -F60 -0.119336262165062 V65 -Q71 -0.130149368765716 V65 -G72 -0.134324228876237 N57 -A62 -0.138211843196561 F58 -I67 -0.139577808029347 E56 -F61 -0.144154847926323 N53 -F60 -0.144903328101432 F58 -A64 -0.14790477542728 A63 -T70 -0.154537900831555 Y55 -F61 -0.159246024040499 A62 -A68 -0.172731671684516 F60 -I67 -0.178785387806775 Y55 -F60 -0.179359583966127 I67 -V73 -0.180189610191324 A68 -V73 -0.197879221317256 A64 -T70 -0.220942302756568 A63 -A68 -0.228333460123869 P59 -I66 -0.250803584651449 F61 -I67 -0.270060078042034 I66 -G72 -0.297981713741355 F61 -I66 -0.32350787635656 A63 -V69 -0.35383779158603 A62 -I67 -0.379329356530542 A64 -V69 -0.456151130719552 F58 -A63 -0.462132091033731