[Fri Aug 26 18:28:09 2016] >Input file: TMB7P399M3D.pdb >TM segments: 172-225 MAIDEN score = 42.2904 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E179 -W205 10 V172 -N196 6.56103459198829 R186 -L209 1.81364075699292 K175 -P199 1.57885984812034 R189 -L212 1.35071051208793 M185 -L209 1.32004328676378 V193 -L217 1.25154132475739 L198 -I222 1.23164298623808 L191 -L215 1.1935786247367 F176 -I201 1.18889191299933 D194 -L217 1.11992692893235 Q173 -L198 1.09905252411908 F182 -W205 1.05159335879496 L198 -H221 1.03048813794532 M177 -I201 1.03046242747612 V190 -S214 0.949770709719983 F176 -Y202 0.948330179817188 I174 -H197 0.93792150523978 K175 -H197 0.921972084611697 L188 -L212 0.91385580769065 D183 -L209 0.854836283154208 E179 -I201 0.831685998865812 L188 -L209 0.77775487944709 H197 -H221 0.73280470732953 V190 -L215 0.728092585740888 P199 -H221 0.721734137054458 F182 -F206 0.667736792006196 T192 -S216 0.655605995664958 Q187 -F210 0.637188159805102 R195 -S218 0.633336931656542 A200 -I222 0.615087166124535 V190 -L212 0.610443879834115 V181 -W205 0.599941715369744 R189 -L209 0.593143494449762 T192 -L215 0.578224565181266 K175 -A200 0.578031276214674 D183 -F206 0.557129879858332 P199 -I222 0.549198807814229 F176 -P199 0.544592006312802 R189 -S214 0.535860202043086 Q187 -L212 0.521945905778832 L188 -F210 0.521551238939194 E179 -F206 0.498922829013613 L188 -E213 0.49493310596212 F182 -L209 0.476529751938065 I174 -R195 0.466852865710623 T192 -E213 0.444611243619684 E178 -I201 0.443295360235317 Q187 -L209 0.421543880088057 R195 -L217 0.421057003511491 R186 -L212 0.420401024450142 L191 -L212 0.410538341233262 Q173 -P199 0.405724794346615 P199 -N220 0.390241385589504 M177 -W205 0.371901370522896 D194 -H221 0.340711676276666 A200 -S223 0.338558908508109 K175 -L198 0.328844259016588 R195 -H221 0.326996387516526 M177 -A200 0.323940904990449 L191 -S216 0.320449087516364 V193 -S218 0.316640134169994 I201 -I222 0.30745997052617 R189 -L215 0.300897081276774 E178 -P199 0.294898060618081 E178 -Q207 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