[Mon Aug 29 16:38:51 2016] >Input file: TMB7P629M17G.pdb >TM segments: 114-177 MAIDEN score = -15.8282 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C139 -L172 1.28717572068792 Y143 -M169 1.10993807169034 A157 -Y166 0.5917041157792 C139 -M169 0.577061274030908 Y158 -V165 0.57089941718391 Y158 -Y166 0.561710500064236 Y143 -A173 0.550891843118082 F136 -A173 0.520044886420465 Y143 -L172 0.504786865575214 L159 -Y166 0.467921536753184 P142 -L172 0.427696807672927 Y146 -A157 0.42474527132169 L159 -V165 0.410929274868119 Y149 -V156 0.408173822512801 C139 -M174 0.406783956464885 Y143 -Y166 0.405937692586271 V150 -H155 0.405237665522302 I145 -M169 0.381087741361298 V138 -Y146 0.353097724221914 V150 -V156 0.348500946302919 L135 -H176 0.3475994936856 H155 -D160 0.34363167080952 R127 -V132 0.336217037184734 W140 -L172 0.327576225401287 T131 -C139 0.318895092731982 C139 -F147 0.316678405686684 Y143 -Q163 0.315504979772437 C119 -V125 0.302726026866382 Y170 -S175 0.282380734229417 C139 -H176 0.282312701095366 H114 -C119 0.27241738442985 D160 -Y166 0.269367121938466 Y146 -Y166 0.265552266929538 H152 -Y158 0.264501494659694 C139 -A173 0.264433931978694 R127 -A134 0.264036830654393 H144 -L172 0.255648420436045 Q163 -A168 0.253694650589015 Q123 -T131 0.246274452881388 Y143 -A157 0.23824913733126 H144 -W171 0.237922201601555 A157 -A168 0.231783468345407 Y143 -V156 0.227572828963657 Y143 -Y170 0.226860067422451 F122 -R127 0.214496240938735 F136 -H176 0.211786713983568 P142 -L167 0.210599850183542 V156 -I162 0.206571072229682 H161 -L167 0.204487848860761 C139 -Y170 0.202823737646685 H155 -Y166 0.200548251372245 C119 -Q124 0.196906373043429 Y146 -M169 0.196500632790344 F147 -V165 0.190948834970751 Y143 -Y158 0.18549601421684 H152 -A157 0.183765824604391 I145 -A157 0.179879923537964 Y143 -P154 0.179551128156756 Y158 -Y170 0.173060013200519 Y143 -H164 0.170850936334899 H144 -M169 0.17018996295494 H164 -M169 0.169342556819689 V150 -M169 0.168843389560452 P154 -H161 0.168459093114251 F130 -C139 0.167349325040546 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