[Fri Aug 26 16:25:22 2016] >Input file: TMB7P629M1D.pdb >TM segments: 159-183 MAIDEN score = -4.0878 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D160 -V165 0.276549559454928 Q163 -M169 0.258470877274348 D160 -Y166 0.258362227579211 H161 -L167 0.252867027053826 H176 -P181 0.176130268221278 L167 -S175 0.144502236931787 Y170 -A177 0.12735527131748 Y166 -A173 0.125843704794384 A168 -S175 0.118613180742857 M178 -I183 0.104131300955268 H164 -A173 0.103659232693809 L172 -I182 0.0938017842234385 L159 -V165 0.0889353938318247 I162 -Y170 0.0878895134705147 Y170 -M178 0.0860551979528925 H176 -I183 0.0848688044077067 W171 -A177 0.067909883126462 A168 -H176 0.0665996806918052 I162 -A168 0.0643818714568232 A173 -N180 0.0363262548386207 Y166 -M174 0.0349932718291068 L167 -H176 0.0309499576133381 W171 -M178 0.0271110153218075 H164 -L172 0.0235358114717985 Y170 -H176 0.0231859201351856 H161 -A168 0.0227155810325153 M174 -N180 0.0221881667083625 H161 -Y170 0.0205916061661631 I162 -L167 0.000865041722028614 M174 -P181 -0.00153762148174774 V165 -A173 -0.0136555877099878 Y170 -S175 -0.0145145504704156 Q163 -Y170 -0.0152318541158243 S175 -I183 -0.0159840510565643 H176 -I182 -0.0379035194496264 M169 -A177 -0.0474606556801973 I162 -M169 -0.0485906597456375 H164 -M169 -0.052338543629932 Y170 -Y179 -0.0525202781208556 A177 -I183 -0.0539781985155816 W171 -Y179 -0.0625809553845398 Q163 -W171 -0.0642427813016734 Y166 -L172 -0.0663420094728457 H161 -M169 -0.0724856180767346 L159 -H164 -0.0740155479897693 L159 -Y166 -0.0750041165498132 Q163 -A168 -0.0806651661774853 A173 -Y179 -0.083326148058573 Y166 -W171 -0.0855684814599238 H164 -Y170 -0.0855753016663945 Q163 -L172 -0.0874946700506616 A168 -A173 -0.095811513220962 V165 -L172 -0.10717738586316 L172 -N180 -0.123869740524618 M174 -Y179 -0.12823668176535 M169 -H176 -0.134286428101106 L167 -L172 -0.144318807369983 D160 -L167 -0.150143221225988 S175 -I182 -0.162546780672312 V165 -Y170 -0.164628077662321 L172 -Y179 -0.171177616683232 M169 -S175 -0.183783759082494 H161 -Y166 -0.211891181181423 M174 -I182 -0.227384136845286 S175 -N180 -0.242120829599118 H164 -W171 -0.242925461967325 L172 -M178 -0.261767941367138 L172 -A177 -0.266486815647723 L167 -A173 -0.271569503128353 A177 -I182 -0.275339604418607 V165 -W171 -0.279169127412811 A173 -M178 -0.286865828951004 S175 -P181 -0.290510988947983 L167 -M174 -0.296070913075579 W171 -H176 -0.299824037373966 M169 -M174 -0.309218974442482 A168 -M174 -0.399077162748175