[Fri Aug 26 16:46:17 2016] >Input file: TMB7Q3H3M11D.pdb >TM segments: 303-344 MAIDEN score = 3.5606 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C330 -R337 10 C330 -E335 1.10462669564218 Y329 -I336 0.891895117635259 C330 -I336 0.736053327565643 C330 -F340 0.649648699081685 Y329 -S334 0.357815140908023 R311 -M319 0.288522910613668 N325 -R337 0.284746314423304 L331 -R337 0.264392316256506 C332 -G338 0.233880805603947 A323 -Y329 0.232346984428065 A320 -F326 0.225429028196976 A320 -Y327 0.219191440865153 M317 -F322 0.211579466920606 F322 -Y329 0.21041689677937 F322 -V328 0.201226766887745 Y327 -G338 0.191597057756673 N325 -S334 0.167480222851806 F326 -S334 0.15751732536447 D316 -A323 0.144810371152754 M324 -S333 0.14148301387202 I336 -I344 0.134204888015285 Y327 -C332 0.133997532670549 A320 -V328 0.132303783255362 N325 -S333 0.125186991665883 S334 -R342 0.118900220713753 V328 -G338 0.112049236047898 F326 -F340 0.11167569211545 L303 -Q308 0.110061075796578 A312 -A320 0.109301688538618 Y327 -F340 0.107372031436234 A314 -N321 0.105825019635586 C330 -L343 0.105720145300535 V328 -T339 0.103879732532077 M319 -Y327 0.101647348794947 V328 -L341 0.100914486273189 V328 -S333 0.100799648688322 C332 -L341 0.0966302134139871 Y327 -S334 0.0825962605128074 L303 -R311 0.0736683981955194 F326 -L331 0.064332466330324 R311 -A320 0.0616225556171714 L331 -T339 0.0586197352088567 M317 -M324 0.0585300332103694 L331 -I336 0.0570163802490957 R337 -R342 0.0569802792060138 Q308 -N315 0.0534653659807329 C332 -F340 0.0526929450579416 C332 -R337 0.052334315755779 L331 -L341 0.0491292424952272 N321 -Y329 0.048322156766431 F310 -M317 0.0462926194615568 N315 -N321 0.0443441410206332 M319 -F326 0.040414224385618 Y327 -R337 0.0393175269442869 L309 -A314 0.0376391019030695 S333 -L341 0.0326252784134593 E335 -L343 0.0279658738128665 D316 -N321 0.0277386422412222 E318 -M324 0.0236270328274338 A323 -C330 0.0231331712967204 V328 -E335 0.0210223814623432 G306 -A312 0.0148509871266436 S334 -F340 0.0112867678916897 M317 -N325 0.00866336763148201 A323 -L331 0.00759359175693941 N304 -L309 0.00500309173058611 F307 -N315 0.00420277186120366 A312 -N321 -0.000593945125022977 Y329 -R342 -0.00247511717029833 V328 -F340 -0.00372451237966986 T339 -I344 -0.0059554168688809 N315 -A323 -0.0121766856818641 R311 -E318 -0.0137538842030798 Y305 -R311 -0.0141520910101485 G306 -I313 -0.0160954456293911 E335 -R342 -0.0194591714498756 Y327 -T339 -0.0212696441571196 Y329 -R337 -0.0228080500782735 E335 -F340 -0.0232017731926989 R337 -I344 -0.0232177880466582 F310 -E318 -0.024444008436737 N325 -C330 -0.0260751798774115 N304 -R311 -0.0273851216207626 R311 -M317 -0.0285584119118951 G306 -A314 -0.0293530906494102 M324 -C332 -0.0313188185029221 L309 -N315 -0.0363179456560667 Y327 -L341 -0.0409929580674357 C332 -T339 -0.0453093628176627 I336 -L343 -0.0492858623469754 G306 -R311 -0.050033413255522 N304 -F310 -0.050894890592029 S334 -T339 -0.0547961148133878 M319 -M324 -0.0555659021742003 N325 -F340 -0.0649018704384154 I313 -N321 -0.0652635652974518 F326 -T339 -0.0660034928974298 S333 -R342 -0.0660622065188456 N321 -F326 -0.0677466410342571 E318 -N325 -0.0684093299574458 F310 -N315 -0.0725059705804285 Y329 -T339 -0.0727106913315541 N325 -I336 -0.074134661665655 Y329 -L341 -0.0752606225776717 F326 -L341 -0.0800755102935709 A323 -V328 -0.0830268686169791 Y327 -E335 -0.0878370418793977 R311 -D316 -0.0886695040277719 C330 -I344 -0.0887488213696637 Y329 -E335 -0.0906179047494668 L331 -F340 -0.091240162250178 Q308 -D316 -0.0920765223665579 F326 -E335 -0.0939475477454916 F310 -D316 -0.0991229906613501 L309 -D316 -0.0999345913964864 Y305 -A312 -0.113183862809831 C330 -G338 -0.115422791638954 N315 -F322 -0.130371238936171 F326 -G338 -0.13050876881812 S333 -F340 -0.131234949035502 A314 -F322 -0.134592619894632 F307 -D316 -0.134887700986786 N321 -V328 -0.139359995372167 M319 -N325 -0.144684615659625 F307 -A314 -0.146282423820188 N325 -C332 -0.150401857727918 V328 -R337 -0.150993873206569 D316 -M324 -0.151164606452483 Y327 -I336 -0.152623082000157 Y329 -G338 -0.152878436063783 S333 -T339 -0.153073138489406 L331 -R342 -0.154865709083565 L303 -F310 -0.158122702604162 E318 -A323 -0.158340826092566 F322 -Y327 -0.159519542458275 Y329 -F340 -0.164572883174974 F326 -S333 -0.166407566256045 A320 -N325 -0.169204517004415 A312 -M319 -0.170548737982188 G338 -L343 -0.170875062562985 A312 -M317 -0.174993262979648 Y305 -F310 -0.17931927547665 A312 -E318 -0.181312117714286 I313 -A320 -0.188890899919661 M324 -Y329 -0.189307861402307 S334 -L343 -0.190591205826491 E335 -L341 -0.197928884803834 M324 -C330 -0.198631585157155 V328 -I336 -0.20088376532134 M317 -A323 -0.202253097102886 F326 -I336 -0.208312025699831 N315 -A320 -0.208669637184653 A314 -A320 -0.209352998102701 S334 -L341 -0.212076891534624 F307 -I313 -0.215212047428662 F326 -R337 -0.21784941915252 R337 -L343 -0.223140092004065 I336 -R342 -0.2237691561393 Q308 -A314 -0.223876150178822 F307 -A312 -0.224134175316783 I313 -E318 -0.22805174331028 M324 -R337 -0.23756277774106 S333 -G338 -0.239369399276389 L331 -G338 -0.250098198415335 Q308 -I313 -0.252672556044817 N325 -L331 -0.252880652061639 D316 -F322 -0.255019499886658 G338 -I344 -0.266950301039952 M324 -L331 -0.269134232295881 C330 -L341 -0.276796380154156 A314 -M319 -0.281531652098947 L303 -L309 -0.295138720875714 I336 -L341 -0.302958088971259 Y327 -S333 -0.314367541484783 C330 -T339 -0.320198137182902 V328 -S334 -0.325750967989249 I313 -M319 -0.376873639984606 C330 -R342 -0.459474282469469 N321 -Y327 -0.490968452942265 F326 -C332 -0.561617435012657