[Mon Aug 29 17:14:14 2016] >Input file: TMB7X5I9M2G.pdb >TM segments: 384-406 MAIDEN score = 3.4270 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W390 -Q396 0.649283695231603 N395 -A400 0.646167763760953 Q386 -Y402 0.471428959432691 I389 -N395 0.470529426109953 I389 -R394 0.470118943504149 Y387 -Q396 0.461443606747233 N385 -W390 0.360454348616471 N385 -R394 0.312774221837264 Q396 -Y402 0.284519300298983 R391 -Y402 0.265415592756477 Y387 -H401 0.255040257826351 Q386 -P399 0.203512073899258 Q386 -F393 0.201439344594162 R391 -Q396 0.199905078988929 N385 -F393 0.17257025761704 I389 -A400 0.168749105830515 A392 -Y402 0.163672831671531 Y387 -Y397 0.153042772946628 I389 -H401 0.149916214483182 A392 -I404 0.149570368843326 A388 -Q396 0.145856739149515 Q386 -A400 0.145803046509339 I389 -I404 0.142646296256959 Y387 -N395 0.131664092843772 A392 -Y397 0.125866416809323 A388 -Y402 0.119532836353213 Y387 -A400 0.109253650783062 R391 -A400 0.105313535465356 W390 -P399 0.101650272182621 Y387 -I404 0.0972493080404235 D384 -W390 0.0967660977727838 Q396 -H401 0.0928272165533532 Y387 -P399 0.0910303234877934 N385 -N395 0.0828663964603635 Y387 -A392 0.0776289723051722 Q386 -Y397 0.0774237719719952 N385 -A392 0.070534437576721 F393 -F403 0.0701108693497865 A392 -A400 0.0672714997249213 A388 -H401 0.0672301149790799 R391 -W398 0.0635261552108797 N385 -Y397 0.0541741283918216 R394 -A400 0.0502067581251211 R394 -P399 0.0475234362051078 Q386 -A392 0.0461615323814355 W390 -Y402 0.0425597746055495 W390 -I404 0.0360116693720584 D384 -R391 0.0220429909931557 R391 -P399 0.0190625217012395 A392 -F403 0.0184404877840034 Y397 -Y402 0.0171538942817957 Y387 -R394 0.0139636196936088 Q386 -R391 0.00848859627569665 I389 -Y397 0.00226565554749669 Q386 -R394 0.00153493461166576 D384 -Q396 0.00105936098870529 W390 -F403 0.000882733106538414 R391 -H401 5.70375059227857e-06 I389 -P399 -0.00233344066420438 R391 -Y397 -0.0266356168947599 Y387 -W398 -0.0278069556678253 Q386 -Q396 -0.0351312077788277 I389 -W398 -0.0365991929266158 N395 -H401 -0.0366540520662508 Q386 -W398 -0.0376037730398215 F393 -H401 -0.0378657008092547 N395 -F403 -0.0422791969764322 N385 -Q396 -0.0431092121343379 A388 -Y397 -0.0480680548552344 R394 -Y402 -0.0488872061791241 W390 -Y397 -0.0516084794837641 I389 -D405 -0.0557057783407363 A392 -W398 -0.0569398332369078 Q386 -N395 -0.0635178731104569 D384 -I389 -0.0660223871381502 Q386 -H401 -0.0667786136126249 A388 -A400 -0.0708366904008968 I389 -F403 -0.0751126668869215 R394 -F403 -0.0757794238386152 W390 -A400 -0.0780294935858595 Y387 -F403 -0.0849533942549727 I389 -Y402 -0.0859301567774211 F393 -I404 -0.0899570440198776 A388 -N395 -0.0939031533586179 F393 -Y402 -0.0995693425131789 I389 -Q396 -0.111306072701412 F393 -P399 -0.112169499180629 W390 -H401 -0.115181526946668 W390 -N395 -0.124441662723533 A392 -H401 -0.13552037946973 A388 -I404 -0.152038938920646 F393 -W398 -0.154110765298246 Y387 -F393 -0.174568385219025 A388 -R394 -0.175994588376493 W390 -W398 -0.210007131850698 R394 -H401 -0.217766729050616 N385 -W398 -0.238783376898803 F393 -A400 -0.252473301532354 A388 -F393 -0.361481919382095 N385 -R391 -0.378034696867068 Y387 -Y402 -0.388781488298383 N395 -Y402 -0.40583945915898