[Fri Aug 26 17:16:52 2016] >Input file: TMB7ZN60S2D.pdb >TM segments: E293-299_E307-314 MAIDEN score = -0.3272 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L295E-L313E 0.118759837595248 A294E-L313E 0.113895303330454 L298E-A310E 0.0381555467434311 L296E-V311E 0.0187051709960477 L295E-C312E -0.00533750415390122 Q297E-A310E -0.0122722053361772 L298E-G309E -0.0578060263402227 L296E-A310E -0.0897539674044987 V293E-L313E -0.0965137424438609 L295E-V311E -0.102746153030409 L298E-V308E -0.104741223706973 L295E-A310E -0.14754960673291