[Fri Aug 26 17:18:48 2016] >Input file: TMB8ECR2M1D.pdb >TM segments: 646-675 MAIDEN score = -1.5523 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L650 -R655 0.87521102552628 Y664 -L674 0.646281063699566 P666 -L674 0.565701252943091 H653 -N661 0.429688581752713 N654 -P659 0.347736695494727 H648 -G657 0.279415080503293 R655 -Y664 0.268819606707755 G667 -L674 0.259028769104401 Y664 -P669 0.253497025191137 P666 -I672 0.239451743767301 P659 -P675 0.235612742785539 G665 -L674 0.231131989792845 G657 -V662 0.220713645293942 Y649 -V658 0.20676601004912 H653 -P675 0.203775962512827 Y649 -R655 0.201213021366635 L650 -P659 0.196114585614098 N654 -L674 0.194433762715318 P666 -P675 0.193855019617623 G667 -I672 0.187110050014341 H653 -V658 0.182352098515217 P659 -Y664 0.176203419668652 H653 -G665 0.169026634561329 Q651 -P659 0.161204488658906 L650 -F656 0.15823327942147 Y649 -V662 0.153370415992767 S652 -N661 0.148887120355024 R655 -F660 0.148556789086749 H653 -I672 0.133958104682819 V662 -L674 0.128739173021958 S652 -V663 0.126783256665101 L650 -V663 0.125215918117787 N661 -L674 0.123820481267232 H653 -V662 0.11673167862664 Q670 -P675 0.0992102769726078 H653 -F660 0.096931713392819 Y649 -P659 0.0943744997747582 H653 -G671 0.077572673340335 A668 -L674 0.0773765568716112 P669 -L674 0.0759204383085645 H653 -Y664 0.0753749980367841 R655 -L674 0.0739086749554396 H653 -V663 0.068914941525521 I646 -G657 0.054161798030171 T647 -F656 0.0514870547413722 H648 -F656 0.0504222061329512 I646 -N654 0.0501416978748028 N654 -G665 0.0482635194087817 H653 -L674 0.046280536350538 Y649 -N654 0.0446564554334696 T647 -G657 0.0438686303045626 V663 -G671 0.0416780004196866 L650 -G657 0.0415332693821515 R655 -E673 0.0376037486687242 F660 -P675 0.0334290229020152 S652 -G657 0.0328133439030334 V663 -P675 0.0326766065593063 Y664 -I672 0.0310051231656523 R655 -P675 0.0280548762005084 N654 -V663 0.0260703828923772 T647 -F660 0.0184858354015625 Q651 -V663 0.0163065337567625 N654 -N661 0.0148098904739078 P666 -E673 0.0144825489941551 S652 -F660 0.0133863955880096 R655 -G665 0.0105084230312222 L650 -P675 0.00878378770974919 Y649 -E673 0.00610853219537599 V663 -L674 0.00478239129499158 V662 -I672 0.00373099684960643 F660 -E673 0.000775885848999014 Y649 -V663 -0.00117004182139535 Y664 -G671 -0.00265091666759343 V663 -Q670 -0.00290733023121859 V663 -A668 -0.00565299428528032 G665 -G671 -0.0171784837352752 G665 -Q670 -0.018524098549018 I646 -F660 -0.020850780277164 N654 -F660 -0.0218452464706607 N654 -E673 -0.0220104584955039 Q651 -V658 -0.0225813468181319 Q651 -V662 -0.0228568585176001 Y649 -F660 -0.0263944718616198 S652 -V662 -0.0273428113968852 S652 -V658 -0.0335900205207853 Y664 -P675 -0.035286511891992 T647 -R655 -0.0365867205967225 F656 -P675 -0.0368032140174801 N654 -Y664 -0.041104863351253 Y664 -Q670 -0.0422143181478781 V663 -E673 -0.042446093686169 I646 -F656 -0.0457776515054897 G657 -P675 -0.0491430116349414 G657 -V663 -0.0511591333984009 F660 -G665 -0.0526468554689296 Y649 -N661 -0.0568540017673569 N661 -E673 -0.0592215684381978 L650 -N661 -0.0610264845763657 L650 -Y664 -0.0611285266921322 F656 -N661 -0.0622522322137242 T647 -V658 -0.0626209953756316 Y649 -G657 -0.0659311483992138 N654 -V662 -0.0777469279293721 V662 -G671 -0.0805521943463239 F660 -L674 -0.0838814793545648 T647 -S652 -0.0839358065952678 G667 -P675 -0.0883912445182746 H648 -H653 -0.0931009424491269 S652 -E673 -0.0958625374950608 N661 -P675 -0.0988554543767748 Q651 -P675 -0.102135312218183 F656 -V663 -0.102685554048375 I646 -N661 -0.102814287001511 Q651 -F660 -0.103051482701582 Y649 -F656 -0.105308327655082 F656 -V662 -0.108137952603568 V658 -V663 -0.109946190180544 R655 -V663 -0.111648380745765 S652 -I672 -0.114049581323082 H653 -E673 -0.116433827359422 T647 -N654 -0.116870932612573 N654 -I672 -0.124467758492161 I646 -P659 -0.130166584460828 H648 -N654 -0.130563390557621 Q651 -N661 -0.131177062646959 G665 -I672 -0.131630254458854 V662 -P675 -0.139397283752264 H653 -P659 -0.139802222234157 T647 -H653 -0.145300141896552 A668 -E673 -0.153186468021473 R655 -V662 -0.154026090888187 G667 -E673 -0.155044401038983 H648 -V658 -0.162477261986942 L650 -E673 -0.165481329565923 S652 -P675 -0.167474487027241 I646 -V658 -0.178763117761451 T647 -P659 -0.181579772199764 H648 -R655 -0.185280279689272 I646 -R655 -0.190295502186322 H648 -F660 -0.198753096144705 I646 -H653 -0.201489108536601 L650 -V662 -0.212308649927016 G665 -P675 -0.222321308056173 Q651 -G657 -0.27559174187802 V662 -E673 -0.276371089095445 L650 -V658 -0.280074370245064 N654 -P675 -0.313478564101059 R655 -N661 -0.321869263729734 I646 -S652 -0.324696943634437 I646 -Q651 -0.333982807288791 Q651 -F656 -0.339858371970355 V663 -I672 -0.341482751214208 G665 -E673 -0.351699618820238 L650 -F660 -0.352295900073296 P666 -G671 -0.618402633785445 Y664 -E673 -0.652885040561234