[Fri Aug 26 17:25:30 2016] >Input file: TMB9EJG8M1D.pdb >TM segments: 63-84 MAIDEN score = -4.4234 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A64 -S69 0.320125003455222 S69 -A75 0.275043508087977 Q70 -F77 0.194171304072026 S69 -A76 0.134678031714271 S65 -V71 0.119873791749486 A75 -A83 0.111401998219183 S65 -N73 0.103664104802212 A75 -V84 0.102321566587649 V67 -A75 0.0967236274601375 V71 -A79 0.0904219981816592 S65 -M72 0.0902011962143776 M74 -V82 0.0811431701864249 V71 -F77 0.0750782271421757 V71 -L78 0.0736642237574958 M72 -A79 0.0720097278857552 Q70 -A76 0.0518436846411984 A75 -V82 0.0469248786286363 A64 -Q70 0.0246763099855984 F68 -A75 0.0123819867733155 M74 -A83 0.0108540276640738 N73 -V81 0.000951776990391506 F68 -M74 -0.00542426307234339 A64 -V71 -0.00817455204122375 M74 -A79 -0.0143290582237503 A76 -V84 -0.0278519235416059 M72 -L80 -0.0301426328372987 F77 -A83 -0.0320765802533556 F68 -N73 -0.0372670957590819 P63 -Q70 -0.0441675562599868 M74 -V81 -0.0474010262715905 N73 -A79 -0.0487816763720383 F68 -A76 -0.0497659843503726 C66 -N73 -0.0507566727884465 L78 -A83 -0.0552143226960702 V67 -M74 -0.0584416248949446 S69 -F77 -0.0681374760288052 Q70 -L78 -0.0739104019927548 P63 -F68 -0.0818084042488416 N73 -L80 -0.0897582627524267 M72 -L78 -0.0914837163882705 L78 -V84 -0.109868588112903 S65 -Q70 -0.125589930515945 Q70 -A75 -0.138660978535987 C66 -M74 -0.149150568519651 V67 -N73 -0.156790378591749 S69 -M74 -0.160271788844581 N73 -L78 -0.214226753636725 A76 -A83 -0.216372596448424 A75 -V81 -0.232257863134256 C66 -M72 -0.238643674001837 P63 -S69 -0.249591248578202 V71 -A76 -0.277887823819308 M72 -F77 -0.28123545346612 F77 -V82 -0.296819152816721 V67 -M72 -0.299428257192545 A75 -L80 -0.302893804741953 F77 -V84 -0.304847864112566 C66 -V71 -0.306062022866935 A76 -V82 -0.345208379952464 M74 -L80 -0.360308061957095 A76 -V81 -0.386451629727572 A79 -V84 -0.444071379276432