[Mon Aug 29 17:27:46 2016] >Input file: TMB9N3M5M2G.pdb >TM segments: 427-460_ 464-478_ 510-524 MAIDEN score = -1.4816 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V428 -S439 1.56237937953022 L429 -I437 1.23610790087443 L459 -L470 0.863159964071574 T460 -L470 0.833216645787986 L429 -I440 0.799485231079241 V428 -I437 0.798906166375473 C445 -F452 0.636834505373587 D431 -C474 0.635472407867864 H464 -R469 0.58540598872735 G427 -N441 0.557927818445203 E448 -C475 0.466447429403215 L456 -F473 0.466224158336651 V428 -I440 0.456228077170339 R430 -V435 0.43508555351792 L429 -V435 0.411904467159155 L429 -R471 0.40694201058555 L456 -L470 0.394709179464585 E448 -K454 0.391641456848361 R430 -I437 0.390659827154415 K454 -C475 0.390242904405781 E451 -C475 0.382774012178174 T443 -E451 0.343002550594425 R430 -A436 0.336053738471103 K446 -R477 0.331182184156933 K454 -C474 0.329956821372273 C445 -C474 0.328612942221985 T460 -R469 0.325781819336107 N466 -K522 0.322664715464015 N466 -I524 0.316151471698696 T443 -E448 0.306918172106311 E451 -C474 0.304416532633226 G427 -V442 0.303697567768035 S433 -K438 0.291969827740207 H464 -G523 0.288692567238512 E448 -C474 0.277087321834375 H464 -K522 0.27694289148237 N441 -C474 0.272950428747166 S511 -N518 0.263265409669316 T443 -T468 0.263045540037107 H464 -L470 0.258973071023751 D431 -V442 0.255203782891567 V428 -V442 0.253932781734881 T443 -C475 0.251047562215477 L456 -G472 0.250418924107713 L467 -G523 0.247734981771131 L456 -T468 0.242235985179957 L458 -G472 0.237636074505912 L429 -S439 0.231065213202548 K446 -E451 0.230077010447995 D431 -G472 0.218020904523847 S444 -A450 0.217780992543185 K438 -R471 0.212357652061186 L458 -T468 0.208023429450615 L459 -T468 0.206968765823353 E448 -V453 0.203199130484809 F452 -G472 0.200019757213393 V428 -N441 0.19783156897589 N466 -G519 0.196922148810758 N457 -R469 0.195956366811176 N457 -R471 0.195921630425874 P447 -G478 0.193264562849997 R430 -N441 0.192503271372712 T468 -G519 0.184496374171389 L429 -V442 0.183098217596422 E451 -F473 0.175681385057065 G427 -S444 0.173984153959913 D465 -R471 0.172754651477543 K454 -L470 0.171079897547478 T443 -K454 0.169170526999633 G432 -C475 0.165598183487424 A436 -G472 0.162142960703428 I517 -K522 0.158692650876029 T468 -K522 0.157075008048606 K446 -G478 0.155939832637584 L459 -G523 0.155107870586099 L459 -R469 0.148205989514836 D431 -I437 0.146952136806511 K454 -L459 0.143550399044712 D431 -R471 0.141970668566811 H464 -G519 0.139000666083886 L459 -I524 0.135370282398737 R430 -F473 0.135293312384683 D465 -A521 0.132476221791919 E448 -N457 0.131782191599536 S433 -C474 0.130767952915164 G455 -G472 0.128158943856283 F452 -F473 0.127495210178709 T460 -G523 0.12621630946017 G455 -T468 0.125149742879808 G455 -C474 0.12471354514612 D431 -S439 0.123786205888013 G432 -I440 0.117213447796341 D465 -G523 0.117100390909807 K438 -R469 0.116776214299279 N441 -G472 0.116527096484485 A436 -R471 0.115548493684216 K438 -L470 0.115292944226178 S444 -V453 0.115292874305749 W510 -N518 0.114623520365618 L458 -L467 0.114167237480176 T443 -R471 0.113068622943948 N466 -S515 0.112835089870656 G455 -R471 0.112118571842178 V442 -G455 0.111897313905866 L456 -L467 0.111081412905193 G427 -A436 0.106761973305274 R513 -A521 0.106489934408212 G455 -C475 0.105810267302259 S439 -R469 0.102745972225004 L459 -R471 0.101950075981692 D431 -N441 0.100380914310424 R513 -G519 0.100169287133356 L429 -C475 0.0986859612034197 F452 -S476 0.0979805273655714 G432 -C474 0.0978525626507025 D465 -L470 0.0977213052674233 L467 -N518 0.0972401782796288 T443 -A450 0.0966771206589048 S439 -T468 0.095270622165861 D431 -C475 0.0949174078190639 K454 -G472 0.0944274307780273 V428 -L470 0.0911914095273965 V442 -R469 0.0907892260929009 K438 -G472 0.0906718237796229 G427 -C474 0.089520317007393 T468 -I524 0.0892425993177051 I440 -R469 0.0887528096420507 V428 -C474 0.088329128942938 D465 -I524 0.0876033518140515 T460 -N466 0.087214683229961 L459 -N466 0.0871770203041979 I440 -C474 0.0862916774192781 A450 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0.0521486651106833 V442 -S476 0.0517467336615582 S444 -R477 0.050830731952535 T512 -I520 0.0495246835782304 V428 -R471 0.0481588771993557 K454 -F473 0.0478178688064002 S444 -G472 0.0459270220763159 R430 -G472 0.0456662130458767 C445 -C475 0.0454375177752997 R430 -C475 0.0441896989351649 D431 -S476 0.0437872927463963 V453 -S476 0.0431175871097538 V453 -R471 0.0427221747152651 T468 -I516 0.0426466125768523 S511 -G519 0.0425440447612702 G427 -V435 0.0424881044694523 S439 -G472 0.0420025062693116 R430 -V442 0.0398772094983371 V428 -F473 0.0386687051632895 V514 -K522 0.0353320939189746 G432 -K438 0.0334883057012472 T512 -N518 0.0331095211000449 S439 -L470 0.0314582202870721 L429 -F473 0.0296907412225114 T512 -G519 0.0286332532754996 T443 -N457 0.027269604670936 S439 -R471 0.0269630136655419 G427 -I440 0.0267785138982513 L467 -I520 0.0262265133120527 I440 -R471 0.0242222096809694 F452 -C475 0.024215023020956 G432 -S439 0.0237770753942064 V428 -G472 0.0231669763955655 G432 -F473 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