[Mon Aug 29 17:29:31 2016] >Input file: TMB9NU38M2G.pdb >TM segments: 426-440_ 536-566 MAIDEN score = -6.3293 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q428 -I435 1.08473468163233 A427 -R433 1.05083261782452 V426 -R432 0.882548400087765 V426 -R433 0.688192857139061 I539 -R545 0.543964556109874 D429 -Q434 0.476965958866879 D429 -I435 0.459434431982324 Q434 -K550 0.454517803646695 M547 -V552 0.32987623167019 L543 -E564 0.325901346336613 A537 -S560 0.293434972371175 Q540 -S563 0.27975860806974 A556 -S563 0.272928942899316 A554 -S563 0.271580959042515 L543 -G549 0.26247935310094 Q440 -E536 0.259550758937217 A542 -S563 0.248478323741782 R558 -M565 0.244449725189594 E536 -T561 0.240990395542295 K550 -D566 0.226146527483334 H544 -L562 0.222584138522562 Q540 -S560 0.219116301574644 V546 -M565 0.214329525391494 R545 -M565 0.205031341058005 H557 -S563 0.204154124843832 Q440 -Q540 0.202443287406215 A554 -D566 0.199920698006417 A556 -T561 0.19732890341533 Q548 -M565 0.186940111623842 S430 -G436 0.182427860406747 R558 -D566 0.179209673222422 V438 -M547 0.17674666190833 T541 -L562 0.176464879608105 G549 -M565 0.175834767014056 V546 -E564 0.174516898866767 Q540 -R545 0.173571808550439 R545 -K550 0.173307222660732 V426 -L431 0.171092511781247 G436 -M547 0.166286843682377 T439 -I539 0.160331242429183 A554 -M565 0.16005220222107 R545 -E564 0.159260454848403 I555 -T561 0.155199970724075 A427 -I435 0.154754357777195 M547 -S560 0.151755659365313 I435 -A554 0.149585307577056 T551 -E564 0.1426922021071 T551 -D566 0.142682209567915 T541 -S563 0.142090387187145 A537 -H557 0.141261649641477 V438 -V546 0.140199550887865 I539 -L562 0.136770860718918 L553 -L562 0.133133959235513 K550 -E564 0.128389082909796 I539 -M565 0.126142649258378 S560 -D566 0.123893187617344 H544 -T551 0.122731356462445 L543 -L562 0.121054941932362 H544 -D566 0.12025247096117 Q548 -L553 0.117861516093773 G436 -G549 0.117649350699677 A427 -G436 0.115575252836124 L543 -S560 0.115409044412183 A537 -R545 0.114357385269881 T541 -E564 0.114121517488311 L559 -E564 0.112291150961177 A542 -S560 0.111137592647722 A537 -R558 0.11013552203816 A542 -L562 0.109595490667283 G436 -K550 0.105403162514556 A537 -T561 0.10027033228892 G436 -T551 0.0993729733343682 A554 -L562 0.0991589839933216 Q440 -I555 0.0989972011609046 H544 -M565 0.0989826044398172 Q548 -E564 0.0972021739740834 G436 -A554 0.0940776058872181 H544 -S560 0.0937939137518322 S538 -M547 0.0920604204365074 G549 -A554 0.0916592079502783 M437 -T551 0.0911985182077722 T439 -A556 0.0905830351774615 E536 -R558 0.0884768817569968 I539 -M547 0.0849165356920225 S538 -T561 0.0847167836969763 R545 -S563 0.0824600294677023 A537 -V546 0.0793377115543983 L431 -M437 0.0782298387335132 E536 -H557 0.0781034843068587 M547 -A554 0.0762804567874316 E536 -S563 0.0745737998958464 S538 -R545 0.0725723840660853 H544 -A556 0.0724815321060168 H544 -L553 0.0693966475994183 R433 -T551 0.0689779074066831 Q440 -I539 0.0683209321330587 Q540 -I555 0.068280255009435 V546 -T551 0.0682766556520637 Q540 -V552 0.0674624341210012 L543 -Q548 0.0672648045917983 Q434 -L553 0.0669441215333029 M547 -I555 0.064291765059691 S538 -E564 0.0640866003792127 R545 -T551 0.0634826879943746 A554 -E564 0.0626773195212622 I539 -L559 0.0615447154874633 T439 -L553 0.0581967376023984 R545 -V552 0.0554777353803095 A537 -L562 0.0551664063378099 S538 -V546 0.0538608763750785 H544 -A554 0.053086641719938 A537 -A556 0.0526966267927493 L543 -I555 0.0513602579079264 D429 -M437 0.0489024796059121 A554 -L559 0.0462915102401551 M437 -M547 0.0426261557179242 M547 -M565 0.0418406923538848 H544 -T561 0.0417690596487978 A427 -R432 0.0405913373656297 V426 -G436 0.0389545552358734 M547 -E564 0.0378901987442015 E536 -A556 0.037874876817857 M547 -T561 0.036150940930322 I539 -I555 0.0357118677989785 L543 -T551 0.0347398713049509 T439 -L543 0.0346465489315628 R433 -V552 0.0343280457679178 R432 -T551 0.0335546721169493 A537 -H544 0.0331045472573326 I539 -A554 0.0330289650195281 Q540 -L553 0.0290872784806293 Q548 -S563 0.0288565893396511 G549 -E564 0.0288197909399417 V438 -I539 0.028606756850905 E536 -L559 0.0251933946057501 T541 -A554 0.0227247365329 A554 -T561 0.0221451671697643 I539 -R558 0.0219330216233702 V552 -L562 0.0213669704705728 A542 -G549 0.0200497218350982 Q540 -A554 0.0184889061878026 S430 -M437 0.0136576647019115 T541 -G549 0.0127142797732998 A542 -Q548 0.0121553106313832 A542 -M565 0.0101473082321775 E536 -E564 0.00939432867512835 L553 -T561 0.00866725918722544 E536 -T541 0.00579320722793764 Q540 -A556 0.0051361456425365 L543 -L559 0.00462467889887463 Q434 -V552 0.00192534849227188 A537 -M565 0.00163679142204387 R558 -E564 0.00124727479507092 R545 -D566 -0.00287094648715569 Q540 -D566 -0.00460007352915737 E536 -R545 -0.0046899516305654 I555 -S563 -0.00521779892231855 E536 -I555 -0.00637900291212734 Q540 -H557 -0.0100180759146102 A542 -T561 -0.0112355229531511 V438 -A542 -0.0114299490657839 M437 -A556 -0.0132555247275805 V438 -T551 -0.0149163461862458 T439 -V552 -0.016575862915122 T439 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-0.0643844907223965 E536 -L562 -0.0686946707127898 D429 -G436 -0.0696349811771442 T541 -L559 -0.070658678794715 V426 -I435 -0.0712356601001076 A556 -M565 -0.0719637978872054 I539 -A556 -0.0729108398680225 Q428 -M437 -0.0733807408282958 L553 -S563 -0.0733875670569457 T561 -D566 -0.073422274041977 A542 -A554 -0.0736457977922185 R545 -L562 -0.0750571799032309 T541 -M565 -0.0781794884045079 Q428 -Q434 -0.0806191113933901 G549 -D566 -0.0827246653964826 E536 -A542 -0.0842487244677015 R558 -S563 -0.0867510321050769 T551 -M565 -0.0914659700730245 Q540 -Q548 -0.091559117106081 I555 -L562 -0.0932432909716216 R433 -V438 -0.0941506820376903 H557 -M565 -0.0946168707598396 S538 -L559 -0.0953682982610493 R433 -K550 -0.0980768599675601 V546 -V552 -0.0981975278672351 L543 -T561 -0.0991431086495433 E536 -S560 -0.0996657098327018 L543 -A556 -0.100844735538087 I555 -D566 -0.101668417367536 V552 -S563 -0.101777697836474 V546 -L553 -0.104419816575351 I435 -G549 -0.104995081066987 D429 -V438 -0.105235483018728 V546 -S563 -0.108418124007957 M437 -I555 -0.108627383754366 V552 -M565 -0.109466852791493 G436 -I555 -0.111427581490355 S538 -S563 -0.113967375925326 L553 -E564 -0.114924022585732 V438 -L543 -0.115083613491666 T439 -H557 -0.126138073160358 T541 -T561 -0.132112166233354 I435 -L553 -0.133001410006308 A542 -K550 -0.134116958841506 S538 -S560 -0.134716506793008 I539 -H544 -0.134997767132561 T439 -A554 -0.135554512138621 Q434 -T551 -0.136629963591524 I539 -S563 -0.136882539448893 H544 -E564 -0.138896183762653 E536 -H544 -0.140242416030964 R545 -A554 -0.142306269112339 I539 -Q548 -0.143378351380477 A542 -E564 -0.144917688155313 V546 -D566 -0.147303201946827 Q540 -M547 -0.149928815912933 H557 -E564 -0.150793394108244 V438 -K550 -0.150834878153857 L543 -A554 -0.15501278262114 S560 -M565 -0.156256839447129 S538 -H544 -0.15999839201296 A427 -Q434 -0.162777047071042 G436 -L553 -0.164194438945649 R433 -L553 -0.164275707405134 L553 -D566 -0.165133465745083 T541 -M547 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-0.252942721324448 A556 -E564 -0.260332598554193 I435 -M547 -0.265702854890778 H557 -L562 -0.273584326905323 V438 -H544 -0.276112614929009 H544 -K550 -0.277344373943348 V438 -V552 -0.279175034117384 M547 -L553 -0.286651535911979 L559 -M565 -0.301117538096594 R432 -M437 -0.306020113494147 T439 -I555 -0.320906000920616 H544 -V552 -0.325619618547983 V552 -E564 -0.328110323292413 Q540 -L562 -0.329858685022605 I435 -V552 -0.337412078080732 I555 -S560 -0.339707422702023 I539 -S560 -0.340222394841073 I435 -T551 -0.342869924879554 H544 -S563 -0.346224406194081 M437 -V552 -0.349672629234645 I435 -K550 -0.353566316852996 S538 -L543 -0.354699367861938 Q428 -G436 -0.365446362858502 L553 -M565 -0.369389619653385 M437 -A554 -0.36955221535757 Q540 -V546 -0.384692614148296 Q540 -E564 -0.388742776943792 A537 -S563 -0.388926997170648 V438 -I555 -0.390191778184848 I555 -M565 -0.399274191298011 M437 -L553 -0.407503941250514 A537 -A542 -0.420251404237816 Q428 -R433 -1.01386132218777