[Mon Aug 29 17:36:29 2016] >Input file: TMC0H9C9M6G.pdb >TM segments: 137-146_ 155-165_ 328-340 MAIDEN score = 19.8839 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C143 -N160 10 C143 -E159 10 F139 -I163 1.22213672152726 C141 -E159 1.20286331093218 S138 -C164 1.02821825796888 C143 -G161 0.813209438321138 F140 -C164 0.584565748503064 Q144 -F156 0.550859814887552 V329 -D334 0.517079697379661 D146 -F156 0.497667601799904 Q144 -H157 0.423535478819186 Q144 -E159 0.292655003661216 C143 -I162 0.28598640413987 R145 -T158 0.245143125333255 T142 -C164 0.243184127584495 C141 -T158 0.2423675656123 R145 -F156 0.221467684047472 C141 -H157 0.21910277606596 T142 -H157 0.214741726986362 R145 -E159 0.202422742195863 F140 -I163 0.191148721142167 C141 -N160 0.154869148676458 G137 -I162 0.14836524724004 S138 -C143 0.140401634550334 T142 -N160 0.127887464146863 S138 -E159 0.127281761418511 Q144 -T158 0.125247318256382 Q144 -R155 0.121148028831952 F139 -Q144 0.104662581347036 S138 -I162 0.100873265534881 R155 -N160 0.100109964536272 V329 -I336 0.0898374377103284 T142 -F156 0.0658637483421314 T142 -I163 0.0655375278608723 R145 -R155 0.0516753282252516 F139 -E159 0.0506254082702799 G332 -N337 0.0431489729001244 T158 -I163 0.039995505098517 C143 -R155 0.0365206995392948 S138 -Q144 0.028112527109617 Q144 -I163 0.0245681367279951 D146 -N160 0.0244975783957262 C143 -F156 0.0243786927946297 S330 -R335 0.0152094783750103 S138 -N160 0.0144736273104139 H157 -I162 0.011160236228557 C141 -Q165 0.00629707458569717 G137 -E159 0.00525523515358817 T142 -E159 -0.00252332414922884 M331 -I336 -0.00325226919821375 R145 -I162 -0.0122229550916986 E159 -Q165 -0.0146860743128505 T142 -I162 -0.0240985151962994 R145 -G161 -0.0241385687460917 F139 -G161 -0.0254265601840924 S328 -D334 -0.0279366941566154 G137 -C164 -0.0336120162778578 C141 -F156 -0.0347536715648129 G137 -T142 -0.0372960892085801 T158 -C164 -0.0508517627205221 N160 -Q165 -0.0570156614190722 G137 -N160 -0.0594880820184347 D146 -T158 -0.060727179866073 S328 -R335 -0.0620482922336643 F139 -N160 -0.066360343733704 R145 -H157 -0.0678936585862371 F140 -T158 -0.0692564375746176 Q144 -C164 -0.0733184966123477 F140 -N160 -0.074241405167701 G137 -Q165 -0.0746253780802497 S138 -I163 -0.0817758441457612 F139 -R145 -0.0886631190002043 D146 -E159 -0.0947968449271778 S330 -I336 -0.105450694239113 G137 -G161 -0.134105013040287 V329 -R335 -0.13848765701878 F140 -R145 -0.144058035426417 S328 -G333 -0.144886330361979 G137 -I163 -0.151540041951128 F140 -I162 -0.175426646976638 D146 -R155 -0.176503511146157 C143 -Q165 -0.178553487989906 R145 -I163 -0.18280056995194 C143 -C164 -0.189746235078615 C141 -G161 -0.189970639608539 C143 -T158 -0.194525078509294 T142 -Q165 -0.195081703287028 C143 -I163 -0.197427651913856 F140 -G161 -0.203061631139811 F139 -C164 -0.207575137337429 F140 -Q165 -0.218705704422714 G137 -C143 -0.223104907318875 T142 -T158 -0.227058241808994 C143 -H157 -0.22711855354543 S138 -G161 -0.237202955478429 E159 -C164 -0.256776406837493 C141 -I162 -0.26079940977921 Q144 -I162 -0.276053141653698 T142 -G161 -0.291123239289091 R145 -N160 -0.308898201962144 C141 -D146 -0.310771345767129 Q144 -N160 -0.328858131622424 F139 -I162 -0.336405679420737 Q144 -G161 -0.358288606071642 F139 -Q165 -0.417680245330528 C141 -C164 -0.44419561998701 F140 -E159 -0.465031720152941 S138 -Q165 -0.493812205882802 D146 -H157 -0.59267255999593 C141 -I163 -0.757718973881405