[Fri Aug 26 17:40:05 2016] >Input file: TMC0H9C9M7D.pdb >TM segments: 86-107 MAIDEN score = 10.3553 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Y90 -T101 10 C92 -T99 1.05018470103033 T86 -C92 1.0395772076027 T86 -T99 0.719952697965893 Y90 -T99 0.410865438855325 Y91 -G97 0.353835327600987 T86 -C94 0.303531372713792 Y90 -G102 0.295932300089775 C92 -Y98 0.266973823919627 C92 -S100 0.262109552818402 S89 -N104 0.258485386674403 Y91 -R103 0.252934146139694 A95 -S100 0.250191032321839 T86 -T101 0.233303696704176 Y90 -R103 0.209169863434948 T86 -G97 0.206279560411396 C94 -T99 0.183844501889857 Y91 -T99 0.169170456091438 Y91 -N104 0.164117187017747 C94 -S100 0.142833652413466 S89 -T99 0.132748433180149 G88 -S100 0.119012004854193 G88 -T99 0.118565148246272 S89 -Y98 0.110044256575148 Y90 -S96 0.0985691966018329 S96 -G102 0.0483885437909679 E87 -G102 0.0365419456703844 I93 -R103 0.0351696567709392 Y90 -N104 0.0279321991207975 T86 -S100 0.0252532791442008 E87 -R103 0.0161497431683717 S89 -E105 0.00675155144293882 A95 -T101 0.00262537392601336 G88 -R103 -0.00130106356079507 C94 -G102 -0.00452292391636178 E87 -S96 -0.00966670973317885 Y91 -E105 -0.010424636090244 T86 -G102 -0.0130353696723495 Y90 -E105 -0.0131959157733039 G88 -G102 -0.0212135030409994 S89 -R103 -0.023661605120473 S96 -T101 -0.0293617078478445 E87 -I93 -0.04134097016094 C94 -T101 -0.0419248584846926 C92 -T101 -0.0454080984541001 Y91 -Y98 -0.0490396850368322 T86 -R103 -0.0504880559963264 E87 -S100 -0.0609022748512187 T86 -A95 -0.0924113043142227 T86 -Y98 -0.0970555207308781 Y90 -G97 -0.101055878533222 E87 -T99 -0.10407034620213 E87 -Y98 -0.105002018714743 G88 -I93 -0.105230012850785 Y90 -A95 -0.109249314884194 T86 -S96 -0.122993981935455 C92 -G97 -0.123081814831817 I93 -T99 -0.123325496993862 I93 -T101 -0.128400824838226 Y91 -T101 -0.131468873869432 Y91 -S96 -0.144223323293021 G88 -N104 -0.147158943575681 T86 -Y91 -0.149537174290433 I93 -Y98 -0.15474935207138 E87 -T101 -0.185588036685921 C92 -N104 -0.18640275107636 C92 -G102 -0.204868412270637 T86 -I93 -0.214678699767011 S89 -T101 -0.229163982497627 S89 -G102 -0.251038176437511 G88 -T101 -0.251643817303027 I93 -G102 -0.270857371982174 S89 -S100 -0.331643696615712 Y90 -S100 -0.336538735824741 Y91 -G102 -0.343835694599743 E87 -C92 -0.351219532735013 I93 -S100 -0.35211248100206 Y90 -Y98 -0.364504605195306 Y91 -S100 -0.395212378975792 C92 -R103 -0.571893489564513