[Fri Aug 26 17:40:16 2016] >Input file: TMC0H9C9M8D.pdb >TM segments: 29-83 MAIDEN score = 19.0939 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D59 -C64 10 Y51 -C70 1.82634886895919 C52 -C70 1.37377800651242 C77 -C83 0.916795848104984 C50 -Q71 0.717637181331226 C50 -N72 0.659918898829275 C52 -Q71 0.632457848855051 N53 -C70 0.58128233619253 Y51 -N72 0.534912211184499 R54 -N68 0.500754984336423 I76 -S81 0.494276916677254 N47 -I76 0.458067683605764 C50 -V73 0.406815081861774 C64 -E69 0.396927832559759 T57 -D67 0.368686850337239 G55 -C70 0.357473664091926 C52 -T57 0.349718891378511 C52 -N72 0.336412214016535 Y56 -D67 0.31738409279067 G45 -G78 0.313382601958145 R54 -N72 0.310310768053285 C40 -S46 0.307298120378988 T57 -E69 0.304068682500651 G60 -N65 0.29660950576973 T57 -C70 0.288168726121514 N53 -N68 0.284919545654053 N53 -Q71 0.284139169999698 G45 -N75 0.27410516566599 C50 -N75 0.273729380964641 N53 -G58 0.25971171250616 C40 -N75 0.25168815329604 N53 -C64 0.24868137481951 N48 -G78 0.245318635195156 Y56 -D66 0.24058755744042 Y51 -E69 0.239837061326508 R54 -N65 0.235291112024333 N75 -S81 0.233946708615048 G58 -D67 0.228737788912375 R54 -D66 0.224730908432537 S46 -S81 0.224194321982124 D59 -D66 0.2231761203186 C31 -R36 0.22267826267592 S39 -N72 0.22024496958556 S46 -V73 0.216942916214432 N48 -C77 0.210822087001678 N48 -N75 0.206742295109257 R54 -C70 0.199935551583296 C40 -T74 0.198858458835147 S46 -N80 0.195304850615499 T57 -N65 0.194185002805404 C40 -N72 0.188097909500296 N48 -Q71 0.185970396473134 S42 -N80 0.184692203479386 A49 -E69 0.182393025926588 T57 -F63 0.181440328870852 S39 -N44 0.179782960568551 Y51 -Q71 0.177972503557142 Y56 -N65 0.172231242933771 G58 -F63 0.166036859138419 S42 -N48 0.1659185519622 G55 -G60 0.162789088489369 N44 -T74 0.159186687532897 N53 -D66 0.157207239259485 R54 -D67 0.153973594382955 Y56 -E69 0.15141118915171 N47 -T74 0.149364304144324 S39 -G45 0.146207297960039 G55 -D67 0.140976685054213 N53 -D59 0.138081226442963 N53 -N65 0.136003066669419 C40 -N48 0.131913026904775 K41 -V73 0.129462718379985 G60 -D67 0.125655718489681 S39 -A49 0.124769186208982 D59 -D67 0.1222859792244 G58 -E69 0.119171586406386 A38 -V73 0.119169391205217 N62 -N68 0.1161254580903 A38 -C70 0.113628761847499 F63 -N68 0.110225047446726 A38 -S46 0.108323778800703 N48 -I76 0.106881459342539 G58 -C64 0.102444898507088 L37 -Q71 0.0971288064768971 Y56 -N68 0.0958186072049694 A38 -G45 0.0944902456834247 N48 -N80 0.0895703166372035 S39 -C50 0.0893523721614936 K41 -T74 0.0855003532836132 S39 -N75 0.0827553807482992 S42 -N79 0.0820725578514843 S46 -Q71 0.0800672997113026 A38 -N47 0.077478187102014 N44 -N79 0.0707387553007855 G55 -F63 0.0698723106835271 G60 -E69 0.0694122182439978 G55 -N65 0.064877523619044 A38 -N44 0.0648639001293434 I30 -H35 0.0629032176240667 S39 -C70 0.060111763196415 S39 -N48 0.0594775685000602 Y56 -N62 0.0574345067589107 C52 -E69 0.0530242973088222 R36 -K41 0.0482771200150882 T74 -N80 0.0476450374999668 V73 -N79 0.0468981981476708 A49 -T74 0.0459862734709979 N47 -N80 0.0432069822334482 N44 -N80 0.0424422470361636 N53 -E69 0.0406181148929954 N75 -N82 0.0406057586149856 N44 -N75 0.0397196756706998 R54 -G60 0.0388910082048302 S46 -G78 0.0375843792407379 Y56 -C64 0.0367105549315294 N53 -N72 0.0366480888109972 G45 -S81 0.0354840568100943 Y56 -T61 0.0320915033258182 T61 -N68 0.0311427770834927 L37 -S42 0.0297428955056751 N48 -N79 0.0296513999394028 N62 -D67 0.0289013242327681 L43 -N80 0.0221977725465514 T57 -Q71 0.0213898878460104 A49 -I76 0.021324783911354 I30 -R36 0.0201937252007749 N44 -A49 0.0189574950602838 S42 -N47 0.0181456864957688 A38 -N72 0.0176500529342603 S39 -N47 0.0149461651933545 L43 -V73 0.0120840846068533 S46 -N75 0.0118961471960344 N47 -G78 0.0118858077635338 Y51 -D67 0.0102476677191916 L37 -V73 0.00751517701119031 S39 -T74 0.00642861155466123 G45 -C77 0.00602325022640438 L43 -T74 0.0022830229927 A49 -N79 0.00133856131442167 N48 -N72 -0.000328565942321557 G45 -N82 -0.00326090952559355 S46 -C77 -0.00368995978520092 N44 -C77 -0.00471773252371932 A38 -Q71 -0.00615167854931875 S42 -N75 -0.0081509003844249 C40 -A49 -0.00864834048780683 S42 -T74 -0.00938162602699899 K41 -N47 -0.0102157107310603 N44 -V73 -0.0141243951433561 G45 -N72 -0.0142730550552068 N44 -I76 -0.0148748301455746 N47 -S81 -0.0152578722886201 N47 -V73 -0.0177376952536314 C52 -N68 -0.018990827428492 N47 -N79 -0.0213952208003203 C52 -V73 -0.0215979132977315 C52 -T74 -0.0238761755312507 D59 -N68 -0.0291723476253747 C77 -N82 -0.030483023037478 T74 -C83 -0.0349184817386923 R54 -Q71 -0.0358493121020751 G60 -D66 -0.0395094571288648 G55 -D66 -0.0404136254445371 T74 -S81 -0.0414809860685038 N53 -G60 -0.0424874292945372 G55 -Q71 -0.0468393799221856 N75 -N80 -0.048390803745928 R54 -E69 -0.0494069348704747 G55 -T61 -0.0568724706364994 T57 -N62 -0.0569545368775097 A38 -A49 -0.0596014178216016 T57 -N68 -0.0602859502321706 R36 -S42 -0.0606801196431777 N48 -V73 -0.063664322028067 T61 -D66 -0.0640490559830411 D59 -E69 -0.0669099639257466 Y51 -N68 -0.0709163501181589 N47 -Q71 -0.0713819775201074 A38 -L43 -0.0725464317267788 R54 -F63 -0.0726706781213087 N53 -V73 -0.0802062942089337 L37 -C70 -0.0862091337992815 S46 -I76 -0.0875708023875355 G45 -N79 -0.094741531020196 G58 -N65 -0.0949379713977275 G45 -N80 -0.0951226168526828 S42 -V73 -0.0954998277518122 N53 -D67 -0.0956213092579739 L37 -N72 -0.0957668804646188 V73 -N80 -0.0971886698223964 D32 -L37 -0.098147053332188 N75 -C83 -0.100709379074456 A49 -C70 -0.102650587748321 N47 -C77 -0.108927038593144 G58 -N68 -0.115084526380754 C40 -G45 -0.118023909926797 Y56 -C70 -0.124069488922641 Y51 -T74 -0.128719075252612 L43 -N75 -0.12962561009008 K33 -A38 -0.131232246523388 S46 -N72 -0.131364886614906 G45 -C83 -0.131599259495426 Y56 -F63 -0.132502107148422 N48 -T74 -0.140053766953467 G60 -C70 -0.143570343044493 A49 -V73 -0.145051053237939 C40 -Q71 -0.146495466682016 G55 -N62 -0.147065538524907 C40 -N47 -0.152203913338454 D59 -C70 -0.152489000407789 K41 -N75 -0.153334391057167 K41 -S46 -0.154598466543159 G58 -D66 -0.161172013501599 G60 -N68 -0.166463608240035 A49 -N72 -0.174244200478101 R54 -D59 -0.176822178815524 S39 -Q71 -0.177490650183201 G55 -N68 -0.180489129801319 T74 -N79 -0.183610715126226 S46 -T74 -0.186342248928545 G45 -V73 -0.188370203798771 L37 -S46 -0.191091809772504 G78 -C83 -0.192022825805756 L43 -N79 -0.192119494750278 G55 -E69 -0.202846078407163 S39 -V73 -0.20554469802248 D59 -N65 -0.206141030252835 A49 -N75 -0.217509351215058 C52 -D59 -0.217564291826639 C52 -D67 -0.219868768976363 C52 -D66 -0.221792749205423 T61 -D67 -0.223061969676445 C50 -I76 -0.225269244441028 T57 -D66 -0.226799345934501 N48 -C70 -0.228960156223422 G55 -C64 -0.236161590275587 G58 -C70 -0.241476054487885 N47 -N72 -0.250816633178382 I76 -N82 -0.256187950061859 C50 -E69 -0.257471888824221 G45 -I76 -0.270574020139894 C50 -N68 -0.295235555675153 T57 -C64 -0.301878652187379 C50 -T74 -0.308323516959817 Y51 -V73 -0.313932632845329 S46 -N79 -0.31662146616706 S39 -S46 -0.339338242425926 G45 -T74 -0.357269556965433 C40 -V73 -0.445501549579425 A49 -Q71 -0.447812278148509 N47 -N75 -0.496992763121886 R54 -C64 -0.533637569390478 I76 -C83 -0.754292573093929 C50 -C70 -0.835903993031123