[Fri Aug 26 17:45:33 2016] >Input file: TMC1BUP1M2D.pdb >TM segments: 82-120 MAIDEN score = 17.6664 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F96 -Q105 10 V98 -F103 10 A91 -R107 1.0408973318159 Y106 -F118 0.788436349213773 V89 -T94 0.672547451517794 V89 -R107 0.619024245513481 F96 -F103 0.514821248006706 V98 -Q105 0.484311319176111 I95 -Y106 0.470279495863599 I95 -R107 0.427862702591228 L83 -M88 0.413750705294428 I95 -G108 0.395272226046663 K99 -Q105 0.3948990719324 F96 -Y106 0.390117427126887 H97 -F103 0.388770428140047 T94 -S109 0.375870370582805 I95 -S109 0.372619479628002 L92 -R107 0.361639701472941 T94 -Q105 0.337617840500367 P93 -Q105 0.333100089545225 Q105 -E120 0.311490114346768 S109 -F115 0.310402636666974 Y106 -I119 0.293947751296022 F103 -E120 0.267637256304195 M88 -R104 0.266616703843323 K99 -R104 0.26137407514191 F87 -Q105 0.260154027493083 G108 -A114 0.25720509600079 L92 -S109 0.235468033333364 L83 -T94 0.22224060406906 F96 -E120 0.216978378894562 F96 -R104 0.21277071312006 D111 -I116 0.205262793968238 G85 -T94 0.202042940868081 L92 -G108 0.193401939209433 Y106 -A117 0.192163857464085 A91 -G108 0.190124010553156 P93 -D111 0.177987893122978 Q105 -F115 0.170307184205242 S84 -Y106 0.167994983811543 E102 -R107 0.159707177141087 A91 -Q105 0.145842236722324 S84 -R107 0.140666717242838 R107 -A114 0.139997750940475 R110 -I116 0.139259490463789 T90 -G108 0.13844812210775 R86 -E100 0.13381301738471 R104 -I119 0.132599957056247 I95 -A114 0.132526699979462 R107 -E120 0.129177482441416 Q105 -R110 0.125538212500531 T90 -S109 0.124892101054201 S84 -E102 0.124295042061418 T94 -F115 0.121876829804945 G108 -I116 0.117632946997444 A91 -R110 0.111328356529857 F96 -G101 0.11034921713194 Y106 -A114 0.109916077291624 F96 -R107 0.105406554903944 H97 -R104 0.103117835799425 P93 -A114 0.101762170124582 I95 -R104 0.101742751334588 L83 -Y106 0.0994580171676782 G85 -L92 0.0975589321230412 T94 -R104 0.0974074425597589 V89 -G108 0.0971903200541568 S109 -A117 0.094919385076893 G108 -F118 0.0939174151959516 H97 -I119 0.0933855486237585 L83 -L92 0.0878120556283108 R86 -F103 0.0865696571224666 L83 -R104 0.0859740293588932 G85 -F96 0.0859078723955511 T94 -K112 0.0829129970967033 L83 -R107 0.0821198621729345 R86 -G101 0.0797784739355389 V98 -Y106 0.0792953121125946 T94 -I116 0.0759499277571489 S84 -I95 0.0757551457290346 F87 -V98 0.0738380653418425 S84 -H97 0.0718984316455232 Y106 -E120 0.070224587198439 L83 -E100 0.0696714734639969 T94 -F103 0.0692361665245653 R110 -F115 0.0684504191510549 R86 -T94 0.0679047572521977 L83 -A91 0.0661118690557514 F96 -E102 0.0660801075352335 T90 -R107 0.0653893180889362 S109 -I119 0.0588361383628575 L83 -G101 0.0561592524414776 H97 -G108 0.0531942123057279 R86 -V98 0.0531265846550235 G85 -R107 0.0523099336740716 G82 -G101 0.0513639191696207 G85 -Y106 0.050689217929321 K99 -Y106 0.0459466669705213 P93 -I116 0.0450999359457813 G82 -E102 0.0432653265365368 H97 -F115 0.0406656380220893 V89 -S109 0.0401473791368119 S84 -G108 0.040044877980411 I95 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