[Mon Aug 29 17:44:00 2016] >Input file: TMC2CQB7M1G.pdb >TM segments: 315-342 MAIDEN score = -0.8663 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N334 -W339 0.386888528180353 A331 -F336 0.348188320683006 Q318 -E323 0.305175149609238 V330 -F336 0.261090469699537 Q318 -Q324 0.247655825035818 Y328 -F336 0.231946898191392 R322 -Y328 0.195186045799765 V317 -H327 0.152668300291761 N334 -F342 0.135541538931292 H327 -Q332 0.124336888134235 A321 -H327 0.118137523745558 A320 -G325 0.111446511124142 D333 -W339 0.107845233929013 P329 -D335 0.107820380112142 A331 -F342 0.103305536595489 D333 -R340 0.101073545359106 N316 -Y328 0.0956664881391021 Q332 -R340 0.0927173780290373 A331 -R340 0.0919782806931178 A331 -T337 0.0883493014957448 E323 -Y328 0.0735669228376126 V317 -I326 0.0727874648207445 R319 -Q324 0.070971467577871 A331 -A341 0.0697958131858849 Y328 -T337 0.0646849689930937 A320 -H327 0.0633523197481674 N334 -R340 0.0617210371846459 V330 -R340 0.0540185710385506 V317 -R322 0.0536947990135232 Y328 -N334 0.0493053463631925 N334 -A341 0.0470287865570982 Q318 -H327 0.0266719377925258 A321 -I326 0.0233534502602359 I326 -A331 0.0205492611250158 Q332 -W339 0.00577532020933202 Q318 -I326 0.00570860557669395 Q318 -Y328 0.00323751019048046 R319 -Y328 -0.002095418228365 R319 -I326 -0.00784435584277188 Q318 -G325 -0.0157747293407193 A320 -I326 -0.0208365616183865 V330 -A341 -0.0218738955136017 R319 -G325 -0.0283045967125783 A320 -Y328 -0.0312736016671595 P329 -F336 -0.0438804482977188 D335 -A341 -0.0535648969265243 V330 -T338 -0.062792971532847 Y328 -D333 -0.0634676533297341 V317 -Y328 -0.0732829160782271 F336 -A341 -0.0756261345209222 Q332 -T337 -0.0808818958460464 V330 -W339 -0.0843205598481025 A331 -T338 -0.0953275603069874 G325 -V330 -0.0966073124902547 Q324 -P329 -0.0969549153974123 Q332 -A341 -0.100629973698125 N316 -H327 -0.10242364867651 N316 -I326 -0.107611412930291 P329 -N334 -0.11832923897463 N316 -P329 -0.125286087593794 V330 -T337 -0.127420855206523 I326 -Q332 -0.143521509754521 D333 -A341 -0.145902269211742 R319 -H327 -0.145962456463865 T337 -F342 -0.150689434723578 N316 -Q332 -0.167772893595842 V317 -E323 -0.16807772611247 P329 -T337 -0.178818046967727 F336 -F342 -0.179874179388105 Q332 -T338 -0.195003328825023 D335 -F342 -0.196707222035281 R322 -H327 -0.197031437866608 D335 -R340 -0.208313731030464 A331 -W339 -0.208792946872626 D333 -T338 -0.211623405687568 Y328 -D335 -0.282037462632108 V330 -D335 -0.300171821839939 E323 -P329 -0.322820744911255