[Mon Aug 29 17:57:53 2016] >Input file: TMC3QTX5M3G.pdb >TM segments: 594-623 MAIDEN score = 2.5909 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L615 -P622 0.800878336649802 L616 -L623 0.738665167936123 L615 -L623 0.716276302594914 L616 -P622 0.583762251435269 A607 -F612 0.572381349259196 R602 -N608 0.5614084612713 K604 -P622 0.439778253674874 K604 -N621 0.418806558838356 D617 -L623 0.367097829335142 G606 -Y613 0.355949029285759 K604 -A609 0.346149217304293 Y599 -K604 0.339221295846525 D595 -R602 0.315036720859758 Q601 -P622 0.275526668652526 D595 -V603 0.268993414658683 F605 -Q610 0.238888624618712 S598 -G606 0.238737544172024 Q601 -G620 0.237564374906922 Q601 -G606 0.231526299819562 G594 -V603 0.218191011665338 S598 -Q610 0.216038780573085 Y599 -P611 0.202847453328659 Q601 -A607 0.200121563888035 L616 -N621 0.190946732134206 S598 -P611 0.189718751837778 Y599 -F612 0.183319917658009 S598 -P622 0.182808632896169 S598 -Y613 0.171637099134667 V614 -P622 0.169500884700018 V603 -V614 0.166658062235377 G594 -G606 0.151431750016396 K604 -F612 0.144362795868512 S598 -N621 0.144064272346035 V614 -D619 0.141026249728303 S598 -V614 0.138889853389657 N608 -Y613 0.136106798312708 D595 -K604 0.118296502487578 K596 -V603 0.105416261544923 V614 -L623 0.104309322934258 V603 -Q610 0.103487204884074 R602 -P622 0.101691424499557 V614 -G620 0.0993212950087301 G606 -P622 0.0990061710114869 K604 -L616 0.0986312470182833 G594 -A609 0.0973120482748113 L615 -N621 0.0949749351296196 F605 -F612 0.09066029640364 V603 -A609 0.0894356145478299 A609 -V614 0.0839951007610118 L600 -L616 0.0817469776377857 Y599 -V614 0.0815958685248219 K596 -R602 0.0745260208572498 L600 -V614 0.074218070347725 S598 -A609 0.0734248519301655 L600 -N608 0.067080119641064 S598 -A607 0.0614645556636724 Q601 -N608 0.0596717616742608 Q601 -Y613 0.0583039328822639 Q601 -A609 0.0567016572204082 S598 -N608 0.0526770290815461 Y599 -A609 0.0501341011376999 N618 -L623 0.0448927343943919 F605 -N621 0.043896875004878 R602 -P611 0.0327192814518638 K596 -Q601 0.0228627213111845 G594 -R602 0.0209460485827053 G606 -N621 0.0186933708966528 Y599 -Y613 0.0183751680180553 Y613 -L623 0.0125966056055145 G594 -Q610 0.0113108405995783 G594 -K604 0.0088554226951616 K604 -G620 0.00863861751700146 V603 -F612 0.00716917468596978 Y613 -G620 0.00290463410076125 W597 -F605 0.00236828103781028 K604 -P611 -0.0014251575158184 Y599 -N608 -0.00161528553438828 W597 -G620 -0.00165593539290043 N608 -V614 -0.00183691764981231 G606 -L615 -0.00207593018058283 K596 -V614 -0.00722347363215725 Q601 -D617 -0.00722595225461609 F605 -L623 -0.0075291827301891 K604 -L615 -0.00831879293203031 W597 -R602 -0.00921583705682671 S598 -V603 -0.00965131744364411 D595 -P611 -0.0134905509032122 Y613 -N621 -0.0154269679627919 R602 -N621 -0.0157740228314294 S598 -G620 -0.0189884351640597 Y599 -Q610 -0.0190089867362309 G594 -A607 -0.0203543152815318 K604 -V614 -0.023978134615076 K596 -K604 -0.0274981820078257 L600 -F612 -0.0306843500041571 A607 -L615 -0.0336010199142525 D595 -Q601 -0.0356500658317682 Q601 -L615 -0.0389551700271635 R602 -A609 -0.041046221454746 Q601 -N621 -0.0417111536201693 L600 -Q610 -0.0483794751866649 Q601 -P611 -0.0515945125602295 R602 -F612 -0.0535573943788138 K604 -Y613 -0.0580536057752714 L600 -G620 -0.0646954781059499 G606 -P611 -0.0670899924194956 L600 -G606 -0.0675981872991231 F605 -G620 -0.0677232230541076 S598 -F605 -0.069696394303526 V603 -Y613 -0.0700011485404515 A607 -P622 -0.070963596406 F605 -P611 -0.0715889885888177 G594 -Q601 -0.0721844529244717 V603 -P622 -0.0764415367712389 V603 -P611 -0.0771796824145565 L600 -N621 -0.0785532007429346 G594 -L600 -0.0791176808810405 A607 -Y613 -0.082801035591036 Y599 -A607 -0.0909045832075356 F605 -L615 -0.0921457402028783 D595 -Q610 -0.0931034057016748 W597 -A607 -0.094043846887522 G606 -F612 -0.099318742957939 R602 -Y613 -0.0998074265943489 V603 -N621 -0.108408189570078 R602 -L615 -0.11015110563566 V603 -N608 -0.110957200403941 Y599 -G606 -0.118854624496574 S598 -F612 -0.119678804580682 L615 -G620 -0.12459475704606 S598 -L615 -0.124746423403292 R602 -L616 -0.125769235562107 Q601 -Q610 -0.131552655336415 L600 -P622 -0.131715424123659 S598 -K604 -0.131871627649477 Y613 -P622 -0.133493963618136 W597 -G606 -0.134447651627414 F612 -P622 -0.135204513915489 R602 -Q610 -0.146068382545578 F605 -L616 -0.148329282682216 R602 -V614 -0.150560893584276 D595 -L600 -0.152419014735165 A607 -V614 -0.152770594888592 D617 -P622 -0.156440135804582 Q601 -L616 -0.156996631878055 L600 -A609 -0.158207075793313 G606 -V614 -0.159933823011399 Y599 -F605 -0.161072260167315 Q601 -V614 -0.165003221410988 F605 -Y613 -0.173046713795407 S598 -L616 -0.175245109926089 K604 -L623 -0.197764794645684 W597 -V614 -0.197972990716054 Q601 -F612 -0.198598341360356 K604 -Q610 -0.224396147124201 G594 -N608 -0.227209401900392 W597 -K604 -0.238011020525197 F605 -P622 -0.252546467638492 L600 -A607 -0.274719283138745 F605 -V614 -0.313543374769694 V614 -N621 -0.332077686628244 W597 -V603 -0.374991499814319 L600 -F605 -0.381957498853286 R602 -A607 -0.707194221245401 G594 -Y599 -0.788676173006723