[Fri Aug 26 18:09:12 2016]
>Input file: TMC3THL2M1D.pdb
>TM segments:  29-60

MAIDEN score = -13.6813

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
L55 -K60   		0.817346406774787
P36 -P41   		0.785019762175512
G51 -F58   		0.23827528231436
P36 -T44   		0.1960959913528
A49 -A57   		0.181423236627964
L30 -P36   		0.171840186833007
S33 -P41   		0.167849817112529
S29 -P36   		0.162782214805388
G39 -R47   		0.121200777964072
K32 -L37   		0.119481173982174
A31 -P36   		0.117837919361452
L46 -I56   		0.0922847318288949
G42 -G51   		0.074932831208947
A40 -R47   		0.0711739933196895
S33 -V38   		0.068517096863574
G51 -I56   		0.0647944130828808
F35 -T44   		0.0645218624115329
T52 -A57   		0.0634277071980556
A31 -L37   		0.0615257379442617
L34 -G42   		0.0574561668996236
S29 -F35   		0.0530422810172873
P41 -A49   		0.0513989174889407
G42 -T52   		0.0492670848825059
T44 -G51   		0.0432453334605367
S29 -L34   		0.0395880437232694
G51 -F59   		0.0359444505820541
L30 -F35   		0.0258181747005888
L48 -A57   		0.0246651085900007
K32 -G39   		0.0120330369388131
V43 -G51   		0.0106329908696892
L30 -L37   		0.000611648557118372
L50 -A57   		-0.00802101084990614
G51 -K60   		-0.00918443789198925
S33 -G42   		-0.00958080730287003
G42 -L50   		-0.0111524344582428
A45 -L53   		-0.0126132664320755
A31 -V38   		-0.0169519947177472
S33 -A40   		-0.017573341667422
G42 -R47   		-0.0266154351954146
F35 -V43   		-0.0266234989726091
F35 -G42   		-0.0482004433560359
L37 -T44   		-0.0492691527709503
A40 -A49   		-0.0543062690639102
L50 -F59   		-0.0617812539342886
P36 -A45   		-0.0628308324125679
L48 -I56   		-0.0635301443118852
F35 -P41   		-0.0635797798864084
G42 -A49   		-0.0727515925231246
A40 -L48   		-0.0783788407380039
L50 -F58   		-0.0813141543866829
G39 -L48   		-0.086351437284927
T44 -L53   		-0.0891576375502967
P41 -G51   		-0.0896987771682338
G51 -A57   		-0.0917212219031001
V43 -L50   		-0.0919710986930422
L37 -L46   		-0.0945682996010966
L37 -A45   		-0.100858417836065
L34 -V43   		-0.102334707654691
V38 -V43   		-0.107053136474581
P41 -L46   		-0.111720471787905
F35 -A40   		-0.117203243870259
L34 -A40   		-0.117364322589056
V43 -T52   		-0.120480349010045
A49 -K60   		-0.121236626076818
L53 -F59   		-0.124509493886774
R47 -T52   		-0.132178301549096
R47 -I54   		-0.133781745516691
K32 -A40   		-0.136705414049743
L46 -L55   		-0.143630445367508
R47 -L55   		-0.147196889869602
P41 -L50   		-0.151461336433078
A45 -I54   		-0.153738451414595
S33 -G39   		-0.153920668463473
L34 -P41   		-0.15590470688243
P36 -V43   		-0.158705566017259
P36 -G42   		-0.160400082191222
L46 -I54   		-0.160462064098755
V38 -L46   		-0.161185881414493
L46 -T52   		-0.162063280387823
R47 -I56   		-0.170747066192642
K32 -V38   		-0.171343087401084
V38 -A45   		-0.174773097788708
S29 -L37   		-0.176137902497643
G39 -L46   		-0.176250327484885
A49 -F58   		-0.17741794586841
V38 -T44   		-0.178911721086748
T52 -K60   		-0.184797850986083
L46 -L53   		-0.188071978889441
L48 -L55   		-0.18907063079435
L53 -K60   		-0.203908613326768
A45 -T52   		-0.223193804030573
I54 -K60   		-0.228171512499407
T52 -F59   		-0.241490344626591
T44 -L50   		-0.24878466360034
A45 -L50   		-0.250155653251861
G39 -A45   		-0.262602071705014
A40 -L46   		-0.263677961279514
A45 -G51   		-0.271900153682167
R47 -L53   		-0.272117560000906
I54 -F59   		-0.272375191300921
V38 -R47   		-0.276120213617987
L37 -V43   		-0.279796880184124
G42 -L48   		-0.292473410670328
A49 -L55   		-0.299213236290898
A49 -I56   		-0.313322323534337
A40 -A45   		-0.314862349513215
A49 -I54   		-0.343161830586238
V43 -A49   		-0.34484772202904
L53 -F58   		-0.354217725178676
G39 -T44   		-0.361231924038052
L50 -L55   		-0.369889377768455
T44 -A49   		-0.375137171024126
L34 -G39   		-0.383992559965494
L37 -G42   		-0.385855547475691
L48 -I54   		-0.391094472571521
L48 -L53   		-0.401063076180719
L46 -G51   		-0.406755608431984
L50 -I56   		-0.417765371588145
T52 -F58   		-0.438879727908425
V43 -L48   		-0.447834323454059
P41 -R47   		-0.489260914283399
T44 -T52   		-0.493752551122291
P41 -L48   		-0.567048522285089