[Mon Aug 29 18:09:26 2016]
>Input file: TMC6BBY3M13G.pdb
>TM segments:  343-350_ 392-415

MAIDEN score = 5.7360

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
I399 -I405 		5.85601228407512
N396 -H408 		1.50867713913763
F398 -H409 		1.06531063566164
F398 -F407 		0.92763266918288
F398 -F410 		0.86086575883917
I399 -F407 		0.672881690786132
D400 -H408 		0.576569119758307
A395 -F410 		0.576388655691471
D400 -F407 		0.518023186494269
P394 -E414 		0.498131780933134
A395 -E412 		0.46308824237283
Y397 -F407 		0.460561137162487
Y397 -I405 		0.458871345666097
A395 -H409 		0.366543005450597
V349 -Y392 		0.356577139147104
F398 -I405 		0.350666560172772
S348 -G413 		0.286774932656817
P394 -Y415 		0.267681689316584
Y392 -H408 		0.267271996849271
G343 -G403 		0.25776262922085
H409 -Y415 		0.253519615400468
V347 -I399 		0.232714003805169
W393 -H408 		0.222564742359206
F398 -H408 		0.212632265500612
I399 -R406 		0.208466252564712
L344 -D400 		0.208377229462525
G343 -D400 		0.207314641128635
G343 -Q402 		0.19300560859325
H350 -P394 		0.186662573149704
Y392 -Y397 		0.186032248275746
N396 -G411 		0.162547610322498
P394 -H409 		0.148891196218883
Y397 -F410 		0.140982279182497
L344 -I405 		0.130994259971682
N396 -I405 		0.130266358812525
Y397 -Y415 		0.128719800304341
V346 -S401 		0.111637851522357
H350 -A395 		0.110804439924631
Y397 -R406 		0.106640616498612
G343 -F398 		0.103153855456089
F398 -G413 		0.102445928180577
N396 -R406 		0.102100644344484
H409 -E414 		0.101951251179796
V345 -G413 		0.099927583969738
G403 -H408 		0.0949637076058742
P394 -G413 		0.0884249691410541
H350 -Y392 		0.0883033893407108
S348 -W393 		0.0857783710321074
A395 -E414 		0.0845716826868257
Y392 -H409 		0.0792617087037153
N396 -R404 		0.0783545603259928
L344 -F407 		0.0772870062494118
L344 -R406 		0.0765993776173967
V346 -I405 		0.0765106195383518
V349 -Y397 		0.0743929780691457
A395 -Y415 		0.0736674218340116
S401 -F407 		0.0734839654363375
L344 -F410 		0.0638153777640413
V345 -N396 		0.0608232327672402
F398 -R406 		0.0606546250485327
L344 -G403 		0.0601023186688331
N396 -E414 		0.0562130764590028
V345 -Q402 		0.0545631076227802
G343 -I399 		0.0539307977394554
V347 -P394 		0.0525451466159765
V346 -G411 		0.0522311954328867
F407 -E412 		0.0521027222488324
P394 -G411 		0.0520506715075799
I405 -G411 		0.0472613064342964
H350 -Y397 		0.0382289820082917
Y392 -G411 		0.036848268795648
Q402 -F407 		0.0357942596577033
V347 -F410 		0.0355540670208574
V347 -G411 		0.0353045533235634
Y397 -R404 		0.0341454356165241
V345 -Y397 		0.0334908997475012
I399 -F410 		0.0324959894670891
R406 -E412 		0.0277018132196485
L344 -Y397 		0.0248830291677766
V347 -D400 		0.0222703407690323
V346 -E412 		0.0177899198135393
H408 -G413 		0.0167820242643694
S348 -F398 		0.0113287535807209
R406 -G411 		0.0104067895132278
I399 -G411 		0.00882304005152834
Y397 -H408 		0.00760728152316448
N396 -Y415 		0.00696165505493698
L344 -G413 		0.00562209415472381
V347 -G403 		0.00336984667288132
D400 -G411 		0.00177437275977488
V349 -G413 		0.00177034633035422
P394 -F407 		0.000605406536968722
S348 -E414 		-0.000997698000733349
N396 -F410 		-0.00712561974091752
F407 -Y415 		-0.00755670355701987
V346 -A395 		-0.00771598612526825
R404 -F410 		-0.00917882961960803
F407 -G413 		-0.00964241605013738
V349 -F398 		-0.0117502897029693
V346 -F410 		-0.0129731532623967
V347 -A395 		-0.0204920493993406
P394 -H408 		-0.0238025609123786
A395 -F407 		-0.0250819275970411
V347 -S401 		-0.0277895534043742
S348 -G411 		-0.0283098154394668
F398 -E414 		-0.0374205654972384
W393 -G411 		-0.0388077644016812
Y397 -G411 		-0.0397983610972319
D400 -R406 		-0.049089258021739
S401 -H408 		-0.0497616726686192
L344 -Q402 		-0.0503003634701873
P394 -F410 		-0.0536282092206326
L344 -I399 		-0.0544889349603901
V347 -I405 		-0.0545521527555426
D400 -F410 		-0.0589257539045709
Y397 -G403 		-0.0607165488805015
Y397 -Q402 		-0.0659149667265047
Y392 -F410 		-0.0677734014551081
W393 -F398 		-0.0688595452644423
F398 -Y415 		-0.0714702356569541
A395 -G413 		-0.0725810438691398
S348 -F410 		-0.074434304380647
S401 -R406 		-0.0752995331956682
L344 -N396 		-0.0780429719308495
S348 -I399 		-0.0806344327603991
Y397 -G413 		-0.0833414314397922
V347 -E412 		-0.0863049188986063
S348 -E412 		-0.0898387078992529
N396 -F407 		-0.0974858607293991
I399 -H408 		-0.100182919582999
V346 -F398 		-0.102071982665704
Y397 -E412 		-0.1034649233112
V346 -G403 		-0.103967235198116
L344 -R404 		-0.10449463369731
V347 -G413 		-0.105105614182726
V346 -N396 		-0.107632706592594
I399 -G413 		-0.109256536870399
I399 -E412 		-0.109286139325111
D400 -I405 		-0.11267048308701
V346 -F407 		-0.115337385443866
H350 -N396 		-0.117816382283049
V345 -I405 		-0.118197466930663
Y397 -E414 		-0.118593498778139
Y392 -E412 		-0.118758104218746
V346 -D400 		-0.124844310517963
W393 -H409 		-0.126159453707817
V346 -R406 		-0.132801452598009
V349 -E412 		-0.132979726484647
W393 -G413 		-0.133882938696259
F398 -R404 		-0.136221661015975
V349 -W393 		-0.137772931158969
V345 -G403 		-0.137805292004836
A395 -I405 		-0.139008604485646
V346 -G413 		-0.141167719671158
V349 -P394 		-0.142348157164291
A395 -R406 		-0.144513618368429
V347 -W393 		-0.145198428715273
W393 -E412 		-0.148290073679902
V345 -F410 		-0.148671306942936
V345 -D400 		-0.157085196031299
R404 -H409 		-0.160690600919927
N396 -E412 		-0.166463395699558
F398 -G411 		-0.167332517367325
F410 -Y415 		-0.167583442808624
V347 -H408 		-0.168673043037754
N396 -G413 		-0.168980440631741
S348 -Y397 		-0.17179872312043
F398 -G403 		-0.180354718697577
L344 -F398 		-0.186596562949633
V346 -E414 		-0.192396339281747
S348 -A395 		-0.193142880398697
V346 -I399 		-0.200141270316325
W393 -F410 		-0.217871746630244
P394 -E412 		-0.217961593723584
L344 -S401 		-0.234803172438168
V347 -F398 		-0.236083485556172
V349 -N396 		-0.240485373354711
D400 -H409 		-0.245131969451166
I405 -F410 		-0.249182526555606
N396 -H409 		-0.263337833709309
G343 -S401 		-0.265110464395453
V345 -S401 		-0.272965376422183
I399 -R404 		-0.273002774071215
V349 -A395 		-0.277337097351379
V345 -R404 		-0.28262930357428
S348 -P394 		-0.289216986101205
V345 -R406 		-0.28971857643369
S348 -N396 		-0.322859283083332
V347 -N396 		-0.337051579407317
I399 -H409 		-0.3558209714247
Y397 -H409 		-0.359545391636705
V346 -Y397 		-0.367032957644154
V345 -F398 		-0.367305120769799
V347 -Y397 		-0.372276913363085
H350 -W393 		-0.383813295351966
V345 -I399 		-0.424478954166478
F398 -E412 		-0.425410591239242
A395 -G411 		-0.481197142706987
A395 -H408 		-0.484158280441586
Q402 -H408 		-0.53270969997503