[Mon Aug 29 18:09:34 2016]
>Input file: TMC6BBY3M14G.pdb
>TM segments:  343-351_ 392-415

MAIDEN score = 0.0670

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
N396 -H408 		1.23905689913284
F398 -H409 		1.05803452734044
F398 -F410 		0.97850526765939
F398 -F407 		0.938416636641656
I399 -F407 		0.671090384581879
A395 -E412 		0.61882239657257
A395 -F410 		0.535675945856303
D400 -H408 		0.507799584931415
P394 -E414 		0.490575325181747
Y397 -I405 		0.465630676810295
D400 -F407 		0.437488504966993
F398 -I405 		0.434762632461993
I399 -I405 		0.356489513479977
Y397 -F407 		0.318425768772238
A395 -H409 		0.301902691805222
P394 -Y415 		0.276515546578963
H350 -Y392 		0.269488301143608
H409 -Y415 		0.257713167513394
S348 -G413 		0.252935041612739
H350 -P394 		0.249750992866675
I399 -R406 		0.249433190103234
Y392 -H408 		0.232868510409834
G343 -G403 		0.222109919292763
G343 -Q402 		0.220296109544984
L344 -D400 		0.218356110795262
F398 -H408 		0.207724767772727
G343 -D400 		0.206093774936527
W393 -H408 		0.197457312929097
D400 -I405 		0.169077653711704
Y392 -H409 		0.161114377734513
N396 -I405 		0.160558958233026
N396 -G411 		0.158802221437195
V347 -I399 		0.157811280827927
V349 -Y392 		0.144952399515756
S401 -F407 		0.140913632064304
H350 -A395 		0.136734428633005
A395 -E414 		0.135691308415234
N396 -F410 		0.134872270935614
R404 -F410 		0.129152001644545
Y397 -Y415 		0.128823905112779
P394 -G413 		0.128550840598726
Y397 -F410 		0.124440192893351
Y397 -R406 		0.119623565677299
I405 -G411 		0.117583198335319
N396 -E414 		0.113339016825194
Y392 -Y397 		0.109659129019911
V346 -S401 		0.0989663357950841
Y392 -F410 		0.098096245773684
V345 -G413 		0.0947772017301998
L344 -Y397 		0.0911057592313052
L344 -R406 		0.0846287828102859
F398 -R406 		0.0838705905000947
L344 -F410 		0.0834380770139937
F407 -G413 		0.0798233528379892
P394 -H409 		0.0781797385772056
V346 -I405 		0.0781507296833528
S348 -W393 		0.0747132181801187
L344 -I405 		0.0731114722351034
A395 -Y415 		0.0706424371567165
G343 -F398 		0.068903425441976
V345 -N396 		0.0673776003515896
V346 -G411 		0.0644624944769134
L344 -G403 		0.0599161472417458
G343 -I399 		0.0544387566848068
P394 -H408 		0.0535685121115685
G403 -H408 		0.0505382798238543
P394 -G411 		0.0496184909457749
A351 -A395 		0.0495413114065242
V347 -G411 		0.0485244081244585
F407 -E412 		0.0479972816110021
H409 -E414 		0.0473514309383345
Y397 -E412 		0.0449332158242504
V347 -F410 		0.0429666860855746
V349 -Y397 		0.0416212082913301
V349 -F398 		0.0395507898560684
V347 -G403 		0.0350642853182306
H350 -Y397 		0.0334397203234849
N396 -R404 		0.0287333701974171
Y397 -R404 		0.0283426637413755
Q402 -F407 		0.0275041191555492
V346 -E412 		0.0273388382301345
H408 -G413 		0.0267031975215698
Y397 -H408 		0.0235243413386752
V345 -Y397 		0.0218918065304909
I405 -F410 		0.0189661072237257
V346 -F398 		0.0128108721621231
V347 -P394 		0.0123395257427976
N396 -Y415 		0.00742797850882475
V347 -D400 		0.00383361032023721
V347 -E412 		0.00217734788747181
A351 -P394 		0.00211543188768437
D400 -G411 		-0.00153796240543691
P394 -F407 		-0.00196061590947916
S348 -F398 		-0.00387036326035206
I399 -G411 		-0.00791934176396536
Y397 -G411 		-0.00827885864748135
V346 -A395 		-0.00878134266516373
S348 -E414 		-0.00893840181745215
N396 -R406 		-0.0111762946894181
G403 -F410 		-0.0115178226887487
R406 -G413 		-0.0145931063190794
L344 -Q402 		-0.0170899567164815
V345 -Q402 		-0.017759420191688
V347 -S401 		-0.0190282083914076
V346 -F410 		-0.0196259403974559
I399 -F410 		-0.0197543783550902
V349 -W393 		-0.0204749282232495
F398 -G413 		-0.0227552465286021
V347 -A395 		-0.0261523714435189
V345 -G403 		-0.0362699662966035
S348 -G411 		-0.0369102151930405
W393 -G411 		-0.0394933101802223
Y397 -G403 		-0.0446348962461984
D400 -R406 		-0.0459612490426788
A351 -W393 		-0.0462852207632589
F398 -Y415 		-0.0510215764324693
S348 -E412 		-0.0520773358748148
L344 -G413 		-0.0557206137766162
H350 -N396 		-0.0564014419594501
S348 -F410 		-0.0567225849520416
D400 -F410 		-0.0589257539194268
V349 -P394 		-0.0599946007390431
S401 -H408 		-0.0635552066126661
W393 -F398 		-0.0641360433444564
L344 -R404 		-0.0687234418714375
L344 -N396 		-0.0695900791984383
Y397 -Q402 		-0.0706979243924162
S401 -R406 		-0.0720589957908293
S348 -I399 		-0.0772107927366754
A395 -I405 		-0.0774958030517636
P394 -F410 		-0.0822952278646216
A395 -G413 		-0.0828778839497826
V345 -I405 		-0.0859068675370729
V346 -H408 		-0.0863393495929108
V345 -D400 		-0.0875956019308139
Y392 -E412 		-0.0885480162416958
R406 -G411 		-0.0890466261948095
V349 -F410 		-0.0928074726726456
N396 -F407 		-0.0961301598159348
A395 -F407 		-0.100784995843193
I399 -H408 		-0.102939108786917
V346 -G403 		-0.105218922186687
V349 -G413 		-0.10527878108859
L344 -I399 		-0.105926520411933
I399 -G413 		-0.110977655241254
Y397 -E414 		-0.112072811217894
Y392 -G411 		-0.113056228591443
A351 -Y392 		-0.113335220643832
L344 -F398 		-0.116814175645702
V346 -N396 		-0.119843263165262
F398 -E414 		-0.119994387928346
Y397 -G413 		-0.123097334506838
F398 -G403 		-0.123842716753904
V346 -D400 		-0.126475482704728
W393 -E414 		-0.129916972636824
V347 -W393 		-0.134336452787987
F398 -R404 		-0.138656199123819
V346 -G413 		-0.14668324578005
I399 -E412 		-0.148327504344314
W393 -E412 		-0.148365404212619
V346 -F407 		-0.148407414728445
V345 -F410 		-0.149290456883982
R406 -E412 		-0.157900271687113
F410 -Y415 		-0.159726392926406
V347 -G413 		-0.162632034873052
N396 -G413 		-0.164381539249635
S348 -A395 		-0.167805391410707
V349 -E412 		-0.168501175742897
N396 -E412 		-0.169766601719179
F407 -Y415 		-0.170555818634956
V346 -E414 		-0.186374430869452
W393 -H409 		-0.186508494105341
R404 -H409 		-0.187328288815374
A395 -R406 		-0.189187033728683
V347 -H408 		-0.191824324044227
F398 -G411 		-0.192637440150029
W393 -G413 		-0.199492022068178
V346 -I399 		-0.200613597332736
I399 -R404 		-0.207246317601715
D400 -H409 		-0.214701053904249
H350 -W393 		-0.21529988071686
W393 -F410 		-0.222481599265998
P394 -E412 		-0.241443427016893
V347 -F398 		-0.255981270136965
V345 -R404 		-0.256292558788288
V349 -N396 		-0.2587413121837
V349 -A395 		-0.260796290341429
G343 -S401 		-0.264783783003047
V345 -S401 		-0.266371037263966
I399 -H409 		-0.270048085668256
V345 -R406 		-0.271708935088241
V346 -R406 		-0.28881471587734
S348 -P394 		-0.289128394194316
S348 -Y397 		-0.291321238532781
N396 -H409 		-0.296403670910298
L344 -S401 		-0.300189297164382
V347 -N396 		-0.314206256307416
S348 -N396 		-0.326485782347125
V345 -F398 		-0.33871272577273
V347 -Y397 		-0.349912148390545
V346 -Y397 		-0.386571810034615
Y397 -H409 		-0.392931109822589
F398 -E412 		-0.407563206940337
V345 -I399 		-0.409124715120137
A395 -G411 		-0.471225337946185
A395 -H408 		-0.511796127345343
Q402 -H408 		-0.535328972278997