[Mon Aug 29 16:39:12 2016] >Input file: TMC6RM28M2G.pdb >TM segments: 569-594 MAIDEN score = 10.1663 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N585 -Q590 10 L573 -R578 0.542087536681743 L583 -Q590 0.510155334029291 R574 -I579 0.457505823942437 V569 -R574 0.428297318054672 D571 -I576 0.367416410607431 N585 -L593 0.366086899228386 D571 -R578 0.303030830605225 S589 -L594 0.256960621886443 D571 -D582 0.250580245151691 Q570 -K580 0.242609098556565 D582 -D591 0.234411716820042 T584 -E592 0.211251281227474 A572 -A577 0.206208982073469 L583 -S589 0.188695156115038 H587 -L593 0.157948312681544 A572 -I579 0.126709321813204 A572 -L581 0.115676777877779 L581 -Q590 0.112817327625744 Q570 -N575 0.111920836088999 S588 -L594 0.104925484800575 L573 -L581 0.102374120295159 L581 -L593 0.0863265318318955 D582 -S588 0.0831634070214582 H587 -L594 0.0802420502392049 Q570 -A577 0.0497492777797309 D582 -S589 0.0438508278840123 D582 -L593 0.0313626201183681 N585 -L594 0.0271157784312472 T584 -S589 0.0240004394500848 V569 -A577 0.0160047279791145 L581 -S588 0.0125067970063597 D571 -I579 0.00555400340501322 T584 -L593 -0.00629069280760319 L581 -H587 -0.0135407130880068 D582 -H587 -0.0151118443042968 L583 -L593 -0.0202315763076282 V569 -R578 -0.0274621445260292 L583 -E592 -0.035095685591461 N575 -D582 -0.039338194806009 R574 -K580 -0.0429819298881968 L583 -S588 -0.047260695062521 R578 -L583 -0.0540442225706012 Y586 -D591 -0.0581860255248063 D582 -Q590 -0.0641436663602539 Q570 -I579 -0.0655867012134728 I576 -L581 -0.0708236947547434 Q570 -R578 -0.0743628681725736 H587 -E592 -0.0747554209953178 T584 -L594 -0.0775844584155596 D571 -L581 -0.0778026068638031 D582 -L594 -0.0866438005508349 R574 -L581 -0.0977982531643837 R574 -D582 -0.115284368985457 T584 -Q590 -0.123389947224765 L581 -S589 -0.126467151733766 T584 -D591 -0.13017507226573 Y586 -L594 -0.150945649900604 Y586 -L593 -0.155962729435402 N575 -K580 -0.15921891287612 Q570 -I576 -0.163016675223403 N585 -E592 -0.168646171067185 D571 -K580 -0.177044306683958 Y586 -E592 -0.183629731167382 V569 -I576 -0.185553786873897 L573 -K580 -0.193966252540798 L583 -L594 -0.203789921377165 A572 -R578 -0.206040476354448 D571 -A577 -0.210214745213054 A572 -K580 -0.221702474844776 N575 -L581 -0.25047207683112 L573 -I579 -0.252826445094423 S588 -L593 -0.293118527179357 L583 -D591 -0.297969988419567 V569 -N575 -0.327152479359484 N585 -D591 -0.345611721218726