[Mon Aug 29 17:04:11 2016] >Input file: TMD0S4W9M2G.pdb >TM segments: 540-548_ 563-589 MAIDEN score = 12.9356 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L572 -E578 10 L572 -I579 1.22172398568822 L570 -E578 0.930221720701779 L570 -L584 0.895145717992095 L570 -L582 0.885627821878387 F571 -I579 0.841048004281404 I563 -T585 0.736201570543244 I563 -L582 0.66025093970582 T568 -L582 0.544585334033172 F571 -L584 0.533870846816081 F571 -L582 0.528399255604742 Y569 -A581 0.526065240755848 L570 -A581 0.514762645050637 Y569 -L582 0.484824198984218 T568 -T585 0.483420847930276 P566 -G586 0.460964390407021 G565 -T585 0.44233184425942 I563 -R583 0.431057035749285 T568 -A587 0.420439416311933 P567 -A587 0.416586355238206 F571 -R583 0.404110574913467 I563 -T568 0.354352990754938 L564 -T585 0.354106255981778 Y569 -L584 0.305746875865394 L542 -P574 0.250321271256831 T568 -R583 0.247967045536731 Y540 -P574 0.244761920160205 L572 -R580 0.242817107215998 P566 -T585 0.236717475330458 Y569 -R580 0.234162985268321 I579 -T585 0.196479247231772 S573 -I579 0.19224697505848 I563 -G586 0.187909326305947 L584 -S589 0.178555343323886 P574 -R580 0.175631041901315 L564 -G586 0.167941782273138 L547 -P567 0.163240069086607 P566 -L582 0.157726075415979 S573 -L582 0.150752034731008 G565 -A581 0.14344353058793 K544 -T568 0.142770916293613 P567 -S589 0.138663522436422 Y540 -L545 0.137441838617496 P566 -R583 0.134798080590082 E575 -A581 0.13367656061879 S548 -T568 0.133182336307136 I543 -Y569 0.132656505316532 F571 -R580 0.123127466146738 S573 -E578 0.11752313329428 L542 -S573 0.113584293220003 Y541 -Y569 0.113115015597642 R580 -G586 0.112738146435786 Q576 -L582 0.110932076208448 R583 -F588 0.108799925610576 F571 -T585 0.106751783540476 L564 -A587 0.10655952455685 A581 -G586 0.106282266047857 Y569 -F588 0.103198043013281 G565 -G586 0.100876272217873 P566 -L584 0.0962907849431254 K577 -R583 0.0940332199877405 Y541 -I579 0.0934922908478399 Y569 -R583 0.0928134584161082 Q576 -R583 0.0910218997481116 L582 -F588 0.0891792140198329 D546 -P567 0.0883176590867886 I543 -E575 0.0853244136651767 P567 -R583 0.0845422076150961 L564 -L570 0.0832312185949315 T568 -S589 0.0803627482052349 L547 -A581 0.0787694403976702 L547 -Q576 0.0787379567682382 I543 -Q576 0.0783408737113025 Y540 -S573 0.075154453197102 S548 -G565 0.0747396136239571 L564 -A581 0.0717442506650188 L572 -A581 0.0689821992977993 L545 -L584 0.0689557348101175 L545 -A581 0.066220630499388 S548 -L570 0.0638643244442338 G565 -L582 0.0635473748040987 Y541 -E578 0.0576331319670249 K544 -S573 0.0501180273151527 S548 -Y569 0.0460337970965843 L542 -L572 0.0459146273970843 T568 -F588 0.0425247139888505 Y569 -A587 0.0423237935613017 L545 -S573 0.0404760620674247 L564 -L582 0.0401753572878452 I563 -F571 0.0363203110657571 Y541 -Q576 0.0318605182159803 G565 -F588 0.0307183010610945 F571 -K577 0.030405041467322 F571 -G586 0.0287071670387986 L564 -Y569 0.0263969397175887 D546 -L572 0.0231907970124945 L570 -A587 0.0185099529392474 F571 -Q576 0.0162861881224972 Y569 -E578 0.0144607827190018 L547 -P566 0.0130692064852962 D546 -Y569 0.00944133687608328 I543 -K577 0.00937948145279144 D546 -P566 0.00456064137221146 L547 -T585 0.00259497337872705 Y540 -F571 0.00228580927089084 T568 -R580 0.00099313921130495 A581 -A587 0.00087513084576063 L547 -G565 -0.000673889665090743 S548 -P566 -0.00172687509282454 S573 -A581 -0.00342252423943123 T568 -L584 -0.00524680370154407 G565 -R583 -0.00562797604096543 P567 -A581 -0.0155554996320966 P574 -A581 -0.0171893815742781 Y541 -L570 -0.0189383600916786 Y569 -G586 -0.0209239516722644 L545 -T568 -0.0256339491716275 F571 -E578 -0.0266271255546902 Y541 -S573 -0.0271831952374648 Y569 -I579 -0.0307734173991632 K544 -E578 -0.0325727271030219 L572 -L584 -0.0331041884127035 R580 -T585 -0.0335026445593247 G565 -L570 -0.0349039261391413 L547 -L584 -0.035120485272607 L572 -L582 -0.038154274361097 T568 -I579 -0.0401000196347914 E578 -R583 -0.0437213989953011 L570 -Q576 -0.0459768897751784 I563 -R580 -0.0494726063100814 F571 -A581 -0.0501119581958971 L582 -A587 -0.0516439126915014 L542 -Q576 -0.0562970334600297 Y541 -D546 -0.0563294442898925 G565 -L584 -0.0577468823325642 P567 -T585 -0.0586671402234318 D546 -F571 -0.0589257050640084 L564 -F588 -0.0591479958243539 L547 -I563 -0.0594695212433045 S573 -R583 -0.0613704815641321 L570 -R580 -0.0614267862357361 L545 -Y569 -0.0624021408690809 L545 -Q576 -0.0663005573417159 Y540 -I579 -0.0679938084175552 Y541 -A581 -0.0707543921356972 I563 -E578 -0.0716470783792769 L570 -E575 -0.0726211248321736 L564 -R580 -0.0744636093610667 L570 -F588 -0.0761581348409006 Y541 -R580 -0.0779664027693179 L570 -R583 -0.0792543958106755 Y540 -L572 -0.0794061681803293 R580 -A587 -0.0798922858359976 L545 -P567 -0.0818392225417264 S548 -I563 -0.0824989538865819 I563 -A587 -0.0841649686453216 Y541 -E575 -0.0849738313492843 D546 -L582 -0.0874792084202695 S573 -R580 -0.0891730676263795 T568 -A581 -0.0892504737933209 Y569 -S589 -0.0909383859345407 Y569 -Q576 -0.0921846819590888 L547 -F571 -0.0923496449652159 T568 -E578 -0.0950643851115336 Y569 -K577 -0.0950924851353907 P567 -R580 -0.0951620809041822 Q576 -A581 -0.101094174545429 I543 -L570 -0.101357248581329 K544 -P574 -0.102453756387241 S573 -L584 -0.103712482652302 L570 -G586 -0.103817511512496 L572 -T585 -0.1062541570889 L545 -P574 -0.112460807830219 L542 -F571 -0.114737621187174 K577 -L584 -0.120655479232323 Y540 -L570 -0.121339541121915 F571 -A587 -0.122148953750655 E578 -L584 -0.126148135717997 Y541 -F571 -0.12765010088663 P574 -I579 -0.128042028524087 E575 -R580 -0.128296596227894 K544 -Y569 -0.130699468606981 Y541 -K577 -0.139026915509571 P566 -F588 -0.13925816895894 I543 -E578 -0.141531946593618 L542 -L570 -0.144886895464354 L547 -E578 -0.152525577183234 Y541 -P574 -0.15259091805742 L545 -L582 -0.155187910352439 K544 -A581 -0.157714395503433 L542 -E575 -0.159355089076781 L545 -E578 -0.162491674835513 I543 -F571 -0.165668062424627 D546 -A581 -0.171911923019328 L545 -F571 -0.176394254651429 I543 -P574 -0.178931535776285 D546 -L584 -0.182035685461963 S548 -L582 -0.183737053179384 E578 -T585 -0.18530997532996 D546 -T568 -0.187899889963139 L545 -L572 -0.188920813169107 L564 -L584 -0.191201790625703 P566 -A587 -0.19126853899358 K544 -L572 -0.194850584858409 K544 -F571 -0.197250705597739 L547 -Y569 -0.201040438288709 L564 -R583 -0.20395741764228 I563 -Y569 -0.206167335116967 K577 -L582 -0.206446071533991 P567 -F588 -0.209444156602469 I563 -A581 -0.212239520951847 K544 -L570 -0.212326122397269 Y541 -L572 -0.212333069358518 I563 -L584 -0.213548472005524 L547 -L582 -0.218198370227024 L547 -L572 -0.221108326116851 L547 -T568 -0.230482967269556 G565 -A587 -0.235067476975115 L570 -K577 -0.239900267505507 S548 -P567 -0.244151998326096 K544 -Q576 -0.246472135027068 I543 -S573 -0.259673536314576 L570 -I579 -0.262573833770107 L572 -R583 -0.267238790220017 P567 -L584 -0.27026006169561 D546 -L570 -0.293246791370713 T568 -G586 -0.305766100031733 I563 -L570 -0.321780787316788 I579 -L584 -0.329954263678703 L570 -T585 -0.335212574775516 L547 -L570 -0.36157445006557 I543 -L572 -0.385178275677688 L545 -L570 -0.386593617917931 L572 -K577 -0.414280975952161 Y569 -T585 -0.421782168675826 P567 -L582 -0.568171710221183 P567 -G586 -0.617202753818046