[Mon Aug 29 17:04:31 2016] >Input file: TMD0SFL2M2G.pdb >TM segments: 509-533_ 544-558_ 588-596 MAIDEN score = 33.1225 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I518 -L553 10 K515 -Y549 10 K515 -L550 5.83498040809241 I516 -I551 1.2584627215882 I517 -L553 1.21735707840282 I517 -L550 1.21575250365213 V520 -L555 1.19832457339705 I516 -L550 1.14281019429921 I518 -I551 1.09086029443036 I517 -I551 1.07529088891934 Q514 -L550 1.04197746145601 I516 -K552 0.733985281064478 D523 -C528 0.648532215095536 I518 -K552 0.611429939304159 K515 -I551 0.593269564426998 I517 -Y549 0.520241006099106 I517 -R591 0.51910809812005 Y521 -L555 0.512716854971209 I517 -K552 0.505365842698281 Q509 -L550 0.50369567475113 I516 -Y549 0.502555550234083 A510 -K515 0.489479503225479 L545 -L550 0.473167600741332 I518 -L555 0.464771838373923 A544 -Y549 0.464655709772087 E532 -A595 0.4638364265449 L545 -I551 0.455254451028632 A510 -I516 0.448600453104481 D519 -I551 0.442007461244748 A510 -Y549 0.439386653470832 Y521 -C528 0.401253221880317 D523 -Y558 0.384197802141521 I518 -R591 0.372947268426467 P511 -P547 0.357917286383698 Y521 -D554 0.356883569223472 Q514 -K552 0.354007932958137 I531 -F596 0.352269939914731 E532 -G594 0.343854950498223 G513 -L550 0.326593124284784 Q509 -K515 0.323466309112629 C525 -T593 0.32079720629915 C528 -H557 0.310639399239509 Q514 -Y549 0.299653694988073 I516 -Y548 0.295177125062709 V520 -L553 0.286921659860277 A527 -A595 0.27729816561117 I516 -L553 0.266311761912921 Q509 -K552 0.259342876224064 D519 -L553 0.250903832456356 Y549 -G589 0.242840000382655 Y521 -H533 0.241108993231526 K552 -H557 0.236964076183062 D519 -Y549 0.236386234286162 V526 -Y558 0.233031452439773 Q509 -P547 0.231135751929372 C525 -G594 0.227932459946789 Q514 -Y548 0.225797761808973 A527 -H533 0.207718687503077 Q529 -F596 0.205059516363652 I531 -G594 0.198369962868902 D519 -D554 0.197970573875403 W524 -Y558 0.19527952258961 C525 -I531 0.189708820991433 I517 -T593 0.189225123214599 I516 -G589 0.188726484932197 D519 -R588 0.179201381338881 H533 -A595 0.178922192349608 I518 -H557 0.17787280848954 A510 -L550 0.173946730343575 A544 -I551 0.172156722566332 C525 -P530 0.164254477276383 A522 -Y558 0.160504885010032 D523 -P530 0.155901989157738 V526 -H557 0.155051601580753 I531 -A595 0.153258507053518 K515 -G589 0.149883080641982 D519 -A595 0.1492598638919 Q514 -R588 0.143775058428517 I518 -Y548 0.143337314321642 C525 -L555 0.13981999564725 G513 -A546 0.137905046342795 Q509 -I551 0.136768697604449 V526 -G594 0.133683604157578 I517 -G589 0.132531509357332 I516 -L592 0.13133862940973 P530 -G594 0.130269553109708 K515 -L545 0.12867307607274 V520 -H557 0.126967504038095 K512 -K552 0.126740379360657 P511 -R588 0.116687037914851 A527 -E532 0.116605412540875 A510 -G589 0.115926094145084 I517 -D554 0.114809162261843 C528 -L555 0.1134343559493 A510 -R588 0.112850446620093 A527 -S556 0.111953876802563 Y521 -A595 0.111863441748753 V520 -E532 0.111778272372339 A510 -A546 0.110890381284896 V526 -S556 0.110785246543983 A522 -A595 0.110268162923213 K515 -D554 0.106873703081123 E532 -D554 0.103404631640092 D519 -L545 0.103169858859485 Y521 -L592 0.0993397313462374 R591 -F596 0.0984513343592224 I518 -D554 0.0961537439900617 L550 -L555 0.0961395666836296 D523 -E532 0.0955999683271129 Y548 -G589 0.0935601857235762 Q514 -L553 0.0927600091937955 C525 -H533 0.092033584913497 G513 -A544 0.0912225230488239 E532 -T593 0.0899240862118686 I516 -R588 0.0874647855048458 A522 -T593 0.087069309256794 C528 -L592 0.0855380973148714 Q529 -G594 0.0848634778436401 G513 -K552 0.0845549150529539 H533 -D554 0.0817243787779041 Q514 -G589 0.0792854503665266 A522 -I531 0.0779866083081835 I518 -A544 0.075913010853016 Q509 -Y548 0.0737442374662424 I517 -A595 0.0725437462430882 Q509 -L545 0.0714082913367817 L590 -A595 0.0713194236337786 I518 -T593 0.0674247659772318 A527 -L592 0.0663340891555993 L545 -L592 0.0661095727576964 Y521 -Y558 0.0630507598393542 A522 -P530 0.0623541932654907 Q509 -I518 0.0614610413310488 D519 -Q529 0.0591345693048748 W524 -L555 0.0585395864394611 A546 -I551 0.0581702228032714 I516 -P547 0.0552844069522846 I516 -D554 0.0549151661889313 C525 -S556 0.0529907961363794 V520 -G589 0.049579549664541 Q509 -A546 0.0486515101712044 A522 -L553 0.0476335988542469 H533 -F596 0.0466609981574049 Y521 -G594 0.0449135005180787 Q529 -T593 0.043793919009103 W524 -G594 0.0412115738900003 G513 -L545 0.0402002660236755 I517 -A544 0.036350308889066 G513 -Y548 0.0362443629798843 I517 -A546 0.0358975702939635 A546 -L553 0.0331898314060806 Q529 -S556 0.0307430820773809 I516 -R591 0.0271349505079357 V526 -A595 0.0261800206996603 D519 -L590 0.0231841870542457 V520 -R591 0.0229411370100001 A510 -P547 0.0222026392108718 I516 -L545 0.0213177003371139 C528 -Y558 0.0205981475398074 I516 -L555 0.0199923372681239 L550 -G589 0.0196002572431153 Q514 -I551 0.019590506443778 D519 -K552 0.0186418994577284 L553 -R591 0.0184902911152909 A522 -E532 0.0174109531184445 K515 -K552 0.0172214336411169 D523 -H557 0.0160024500171412 H533 -G594 0.0147911784731771 A522 -G594 0.0142974575448898 A510 -K552 0.01339111002053 C528 -S556 0.0132041601782631 Y521 -I551 0.0111983040561241 A510 -L545 0.00968925247958907 P511 -G589 0.00921923173785455 P511 -I551 0.00816107046620917 A510 -I518 0.00784828559649675 K515 -A546 0.00618933013199036 V526 -T593 0.00508885201864284 D519 -H557 0.00376320592943946 C528 -R591 0.00220003855824835 Y549 -R591 0.00189999452531872 V520 -A595 0.0010806560687473 Y521 -K552 -0.00150460652695461 V526 -H533 -0.00258013006111368 P511 -I517 -0.00283445647079472 D519 -A527 -0.00452288096866527 V520 -Q529 -0.00573055827865487 Y549 -R588 -0.00613961932083695 Q514 -A546 -0.00762837789978477 Y521 -P530 -0.00864935406013245 I517 -P547 -0.00996362791044858 E532 -S556 -0.0100052870530963 G513 -L553 -0.0113629882534232 Q514 -A544 -0.0142644611627976 I531 -L592 -0.0148237521682244 I516 -A546 -0.0158833352635401 P511 -I516 -0.0165233827317897 C525 -A595 -0.0177543031939924 D519 -P530 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