[Fri Aug 26 16:56:10 2016]
>Input file: TMD0SNV1M1D.pdb
>TM segments:  540-562

MAIDEN score = 0.7312

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
Q556 -H561 		1.13988830869902
Q556 -Q562 		0.9361439046954
L552 -D558 		0.661972331576195
Q541 -P546 		0.647199035185185
L554 -H561 		0.576470895029257
K551 -Q556 		0.358983158959576
L552 -H561 		0.357944709162752
L552 -Y557 		0.319946026876972
L552 -S560 		0.258159627374848
H542 -K551 		0.236053466797345
L544 -L549 		0.200601668410028
L554 -S560 		0.197528585813339
I550 -H561 		0.146976456242256
K551 -S560 		0.135899110978979
D553 -D558 		0.124247434629273
L544 -L552 		0.0931879490530902
I550 -L559 		0.0926605237803733
H542 -L549 		0.090270087897661
K551 -Y557 		0.0873170001355894
H542 -Y548 		0.0861040646898674
Q541 -I550 		0.0845647160328955
A545 -L552 		0.0498500969532765
I550 -S560 		0.0470275097014214
A543 -I550 		0.0416819488911955
L554 -Q562 		0.0326251132181063
Y557 -Q562 		0.0213682501497807
D553 -L559 		0.0119299654072211
A545 -K551 		0.0108353092570178
H542 -I550 		-0.00454172277985831
V540 -Y547 		-0.00532327349610195
Q541 -Y548 		-0.00902455183543616
V540 -L549 		-0.0247861178533286
V540 -P546 		-0.0335871212890977
D553 -Q562 		-0.0401763765989891
S555 -H561 		-0.0454262894259621
I550 -D558 		-0.0506922643393031
I550 -Y557 		-0.0614249868241776
V540 -Y548 		-0.0656222969788143
D553 -S560 		-0.0672004693676556
H542 -Y547 		-0.080951237714725
K551 -L559 		-0.0821221456927601
A545 -I550 		-0.0878378616221891
Q541 -K551 		-0.0954068518874127
K551 -Q562 		-0.0961977476148714
L554 -L559 		-0.109997024507437
Q541 -L549 		-0.119524318753776
P546 -K551 		-0.134094007332713
I550 -Q556 		-0.136643862769244
A543 -K551 		-0.13766333224657
K551 -D558 		-0.175652041537104
L544 -K551 		-0.2024660997273
A543 -L549 		-0.213814762696244
A543 -Y548 		-0.216695171070302
K551 -H561 		-0.221142283021828
S555 -S560 		-0.277453207231529
L552 -L559 		-0.279897452269479
V540 -A545 		-0.386127282572826
L544 -I550 		-0.417359400363566
Q541 -Y547 		-0.466618648929886
L552 -Q562 		-0.513343702405873
S555 -Q562 		-0.630103358205423
D553 -H561 		-0.827343056612892