[Mon Aug 29 17:08:13 2016] >Input file: TMD0YZV6M2G.pdb >TM segments: 423-441_ 559-576_ 666-694 MAIDEN score = -17.1492 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V434 -R439 0.787119114831563 S426 -I431 0.68042463561717 Q572 -K685 0.445958823437959 L674 -L679 0.365830709342014 L689 -R694 0.34975522366814 H559 -N566 0.331880359831665 R672 -K677 0.330888081527517 N566 -K677 0.302321956517353 Q572 -M681 0.296715372848006 M686 -R694 0.287640486245564 I667 -L688 0.286028428293927 D573 -M681 0.282997635950329 G429 -G438 0.279224382236532 V680 -M686 0.274721117802326 R564 -Y569 0.258522848337903 S669 -K677 0.257337929660248 Q671 -S687 0.254608002374822 R564 -M570 0.254483779414671 Q668 -S687 0.249044879687476 Q671 -N676 0.239082395035052 T683 -L688 0.235305386442201 P675 -L691 0.221839384274673 Q671 -M681 0.208768437841823 Q668 -P675 0.207397478949935 H684 -T690 0.198726444359339 G568 -P675 0.196708345420162 H559 -R564 0.191120686268496 T678 -D693 0.190699257923821 G568 -N676 0.183795315645186 P675 -R694 0.174966380426323 P571 -S669 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