[Mon Aug 29 17:21:32 2016] >Input file: TMD3B4X5M1G.pdb >TM segments: 618-626_ 681-711 MAIDEN score = 20.9999 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D692 -K709 8.94273803716908 I689 -I705 1.62862325320461 I689 -I704 1.5082515432601 S690 -I705 1.41038733282194 T693 -L707 1.19880292045117 D692 -L707 1.14765191629354 L682 -D703 0.895320836846712 V691 -I705 0.85961378705449 D692 -I705 0.808613650459664 L682 -I689 0.798640680471822 A694 -K709 0.794304844143756 T693 -L706 0.780953545875265 I687 -S702 0.734508145252253 V691 -L706 0.654729315144313 R683 -S702 0.643076208701745 L682 -A701 0.640519724418246 L682 -I687 0.636737732130954 A694 -L707 0.626300400587647 R683 -I689 0.583192143123085 V691 -L707 0.568143427882248 I689 -L706 0.457367004951591 L682 -S690 0.430936323982858 S690 -A701 0.395998616907169 I689 -S702 0.395018398851636 I697 -I705 0.345067955522767 T693 -I705 0.338729976663187 V691 -D703 0.328750331430262 I687 -I704 0.297068611068202 R683 -A701 0.293988771467741 D700 -I705 0.287584124339428 V691 -S710 0.285894292343489 A694 -L706 0.278072155613325 V691 -L711 0.275552181777758 T693 -D700 0.255369033165519 D692 -L711 0.24763056755191 T693 -K709 0.228764711313528 D692 -D703 0.223064791330615 A694 -E708 0.214246900009719 I697 -L707 0.205461792456062 G688 -I704 0.200607470959932 K699 -L707 0.184727186645932 N696 -L707 0.174260310206895 T695 -L707 0.169010701331756 T695 -D700 0.168484058707048 A694 -S710 0.163320738676974 G688 -D700 0.156854983089463 A685 -S690 0.145841856041407 N696 -E708 0.137851747554052 I687 -A701 0.136835467821827 K699 -L706 0.135050057855296 N696 -A701 0.132907807722357 L682 -V691 0.129854765132691 A681 -D703 0.12931281459883 I689 -K709 0.126801602209929 A681 -G688 0.126115412528082 S690 -A698 0.123574807042521 D700 -K709 0.122319272025011 L682 -G688 0.11964917638884 A694 -I704 0.114443343286575 A698 -I704 0.112867123697241 D692 -K699 0.111087823860241 D692 -S702 0.10799705352296 D692 -A701 0.0991975645996641 I618 -I623 0.0973734300255735 T695 -K709 0.0915176358127714 R683 -D700 0.0913385707945533 L682 -L706 0.090970227463955 S690 -L706 0.0842655345634995 S690 -I704 0.083641677660979 S690 -T695 0.0835600389890383 D692 -I704 0.0744824488290299 R683 -S690 0.0739950729706408 I689 -A698 0.0707734797580302 T695 -S710 0.0690833748148019 I697 -L706 0.066851948140099 I689 -A701 0.0649501676621593 S690 -S710 0.0614427511711702 I704 -L711 0.0589655922380377 A698 -L706 0.0587712674197469 V691 -K699 0.0581632088948507 A698 -L707 0.05277684849552 A694 -L711 0.0524252128170519 A694 -A701 0.0503423512290448 I687 -L706 0.0492958589859911 I618 -L711 0.0342983472606946 T693 -D703 0.0313149941574009 S702 -L707 0.0282407395220139 A698 -D703 0.0253490225994463 S690 -N696 0.0249511846592694 I687 -I705 0.0241786849614529 D686 -A701 0.0233485299788316 S690 -K699 0.0226954828006377 D686 -I704 0.0224371198731275 T695 -I704 0.0197155437124894 T693 -S710 0.0192333822034403 K699 -I704 0.0146554426071104 A685 -A701 0.011800207667032 L682 -K699 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