[Mon Aug 29 17:23:05 2016] >Input file: TMD3B9F7M5G.pdb >TM segments: 33-54_ 83-97_ 114-135 MAIDEN score = 37.4440 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S120 -Q127 10 L89 -I119 10 L89 -L118 10 L118 -A130 10 I119 -A130 2.168873822898 S90 -I119 1.50343103567667 V114 -T126 1.4703791739334 N93 -L118 1.01388165503816 L118 -L129 0.901744399562802 V114 -V123 0.795828898005668 S115 -T126 0.744437716669942 L118 -Y133 0.688005291258266 F117 -A130 0.671405617940769 I88 -F117 0.670157672214522 V92 -F117 0.66417532910988 V96 -G121 0.658856176561497 S90 -S120 0.63503951909416 V114 -L125 0.630723279059803 I119 -G131 0.624991096180425 N93 -A116 0.616645128351617 V92 -I119 0.602370816503962 N93 -F117 0.600966231681413 V114 -G124 0.5955200380017 L89 -S120 0.558991817757355 V92 -L118 0.547003898110702 S120 -G131 0.538136815204712 L89 -A130 0.528180146602912 I94 -G121 0.518163581767999 S120 -L129 0.507194283409679 V96 -A116 0.485641958252537 F91 -L118 0.480173252719688 N93 -Q127 0.478304962132958 G121 -I128 0.450493280736069 F91 -I119 0.447955382758426 E86 -A134 0.440340811653039 L89 -F117 0.437719355107749 V96 -S115 0.425676152581784 S115 -L125 0.404110077449697 T122 -Q127 0.395719023968504 A85 -A134 0.391955740298259 I88 -L118 0.38853204386017 I119 -T126 0.381830198677127 I88 -I119 0.373251684205893 F87 -I119 0.368065693055438 F117 -L129 0.36628325002663 I119 -A134 0.365773688419753 V96 -T126 0.363223315427664 N93 -A130 0.351740150084481 V96 -V123 0.347155766946198 F117 -T126 0.345285621260523 A85 -S120 0.321432461831999 A116 -G131 0.315537519550697 G121 -G132 0.31141115343863 S90 -G131 0.30016846665381 A116 -G132 0.298246504834458 S115 -L129 0.296894310568962 L125 -A130 0.29196297509471 I119 -Q127 0.290375127812228 L89 -G132 0.28923405327199 A116 -L129 0.289104713774016 S90 -L118 0.278759493422506 S115 -G131 0.27372313580859 E86 -Q127 0.27195524504575 G124 -G132 0.271154042541446 S120 -Y135 0.252141023910839 L118 -G131 0.251805681872806 N93 -V123 0.250139655165746 K35 -Q43 0.246326670204589 T97 -T126 0.246093099910196 T97 -T122 0.23377146486628 F95 -Q127 0.233065948793779 F91 -Q127 0.231153615318327 F87 -Y133 0.224407032830933 A116 -T126 0.22114295159109 F117 -Y135 0.217510223406133 T97 -V123 0.209007829884756 L118 -Q127 0.208991375243837 L118 -A134 0.20649462472012 G121 -Y133 0.202508822616764 C84 -Y135 0.197802523944628 I88 -N93 0.19242573972762 T97 -A130 0.185912686472326 A116 -T122 0.180379407432222 G121 -A130 0.174392613482586 S115 -Y133 0.173954705947519 C84 -G131 0.169313682605806 N93 -G131 0.163336809473409 T97 -I128 0.157798037838268 V92 -A134 0.155592831607656 N93 -Y133 0.154935306136271 S115 -G132 0.15339219971073 A85 -G131 0.150893353426491 V92 -A116 0.148996517644008 F95 -F117 0.147497621747069 V92 -S115 0.145867173052589 I119 -G124 0.14481303076445 E86 -I119 0.144793402402285 V114 -Q127 0.141348277611659 I94 -L129 0.140369526806573 E86 -F91 0.140069407794281 I94 -S120 0.137950097671656 L118 -I128 0.137028824263513 I94 -V123 0.136145802394303 S90 -T122 0.133588031862318 S115 -T122 0.129324361088504 E86 -G131 0.12778286080718 G124 -G131 0.12700233737551 I88 -G131 0.12426947513154 I88 -T126 0.123885567220692 E86 -G132 0.121974354011976 V92 -L129 0.121451445413211 T122 -G131 0.120645625772404 T97 -L125 0.120095546718209 E86 -G121 0.116509986139105 G121 -Q127 0.115968419810675 G121 -A134 0.115873707744781 L89 -L125 0.115739151343951 A116 -A134 0.113101419345034 F87 -A130 0.112710976175094 V92 -G124 0.112320077523877 S90 -V123 0.111129425817471 V114 -G131 0.109824473673108 L83 -A134 0.108959191547336 A85 -G121 0.104839552908183 V114 -I128 0.10202140500609 I88 -Q127 0.100285027555879 T97 -G121 0.0998653962490961 T122 -A130 0.0991582062870856 F95 -G121 0.0979505778098542 L33 -I41 0.0971719856598678 V114 -G132 0.0962950184219238 V123 -G131 0.0955425951878563 V96 -V114 0.0952666347677438 L118 -Y135 0.0944246360764094 A85 -I119 0.0935246579553795 I119 -L129 0.0905896174099499 T97 -A116 0.0879595413572898 C84 -S120 0.0859743097731898 I94 -S115 0.0817101999781791 L89 -V123 0.0806785071783365 F95 -L125 0.0793743013978934 S90 -Y133 0.0782340862447075 L83 -Y135 0.0771914920384233 F117 -G124 0.0768455532753847 V92 -T122 0.0765222678968636 C84 -L89 0.0759422626015063 I88 -G121 0.070910334132086 A45 -G52 0.0692899387690717 F95 -L118 0.0670242611458338 Q43 -A51 0.0667645910776109 V92 -G131 0.0662262755865806 L89 -V114 0.0646880676994419 A85 -I128 0.0627650383161376 V92 -Y133 0.0579883672515775 C84 -A134 0.0576718120442168 A85 -N93 0.0564042448229563 I88 -L129 0.056006000405727 V123 -I128 0.0558494983011748 S90 -G132 0.0547530872390984 S115 -S120 0.0543046272924628 A85 -A116 0.0540932063396149 A85 -L129 0.0538947587366421 C84 -A130 0.0538737357448555 Q127 -Y135 0.053380845263002 V96 -G131 0.0522321880129211 Y39 -T122 0.0521899397124759 F87 -T126 0.0496886059644863 F87 -A134 0.0491653808126618 T126 -Y135 0.0455981737391498 L83 -A130 0.045428577829874 L89 -A134 0.0445384098303965 L83 -L118 0.0434565070794779 F91 -V123 0.0433990844018054 V123 -G132 0.0426829266285897 V96 -A130 0.0424830926074158 V96 -I128 0.0418191186858126 A116 -A130 0.0404720765215751 S115 -A134 0.039533731364287 S90 -G124 0.0387803666503919 F91 -T126 0.0386611345637489 N93 -A134 0.0385461016953375 F91 -V114 0.036362339746661 V114 -G121 0.0360457642229672 S115 -A130 0.035649190615227 F95 -G124 0.0352595030809897 F91 -A130 0.0351602600300822 A116 -G124 0.0341677421166349 I88 -S115 0.0327011930068561 Y39 -G46 0.0320080660837307 F87 -A116 0.0286227876776701 F91 -T122 0.0274561562554851 S90 -L129 0.0264615324888489 F91 -F117 0.0252474247018988 V38 -Q43 0.0250351249558705 S90 -I128 0.0236432153130686 I94 -G124 0.0215972429605968 F91 -A134 0.0199929525788782 S120 -I128 0.019390607570507 F91 -S120 0.0174094185044702 F117 -Y133 0.0174026724326364 I119 -Y133 0.0172737507313432 V114 -T122 0.0170066966929299 I94 -A130 0.0164245564872152 V92 -I128 0.0160215237934964 G121 -Y135 0.0149586368548213 N93 -T122 0.0140688396668032 L118 -T126 0.0139859348813971 F91 -S115 0.011516159783534 S36 -A45 0.0102274187359299 I88 -T97 0.00917926734009811 A116 -V123 0.00828031710556676 F117 -Q127 0.00765548146574346 S36 -F44 0.00684231182497164 F87 -G121 0.00627387314423933 S34 -I41 0.00393778580299209 F117 -V123 0.00393380249716446 Q43 -G52 0.000589163457802577 L83 -S120 -0.000806715402513081 A130 -Y135 -0.00139970027343139 G46 -L54 -0.00159505054260567 F95 -A116 -0.00263240016471644 A85 -Q127 -0.00290331193129156 E86 -S120 -0.00332162634335875 L89 -F95 -0.00506840189942803 C84 -I119 -0.00522669476868742 A85 -F117 -0.0121976258571848 V92 -V123 -0.0126760996742354 V92 -S120 -0.015647082146252 A42 -G50 -0.0178940738915851 E86 -Y135 -0.0199058239140699 G124 -Y133 -0.0200948491391326 A85 -G132 -0.0204766084639361 Q43 -G50 -0.0224859048358051 I94 -L125 -0.0226468690669881 Q43 -T122 -0.0245342333950984 V114 -I119 -0.0263306758357427 I88 -Y133 -0.0268435161865199 A85 -L118 -0.0272915896964054 I94 -V114 -0.0273675134260776 F117 -L125 -0.0275316494424001 S90 -V114 -0.0277958767074677 S120 -L125 -0.0303343903573339 N93 -G124 -0.0311469565964593 A85 -T126 -0.0326904245586326 S90 -Q127 -0.0370200154105667 V92 -L125 -0.0375094636828965 E86 -L118 -0.0395807616060928 Y39 -G47 -0.0398957427722713 C84 -L118 -0.0411311458613906 S90 -A134 -0.0416864494557236 V114 -Y133 -0.0431373595990028 S115 -V123 -0.0439023965088303 F95 -A130 -0.0448063435168882 E86 -L129 -0.0449165165030663 G121 -L129 -0.04637737317241 T97 -F117 -0.047039166740094 E86 -A116 -0.0478978568195816 Q127 -A134 -0.0479580629106966 L83 -I119 -0.0508398476466324 F117 -T122 -0.0509641015449622 Y39 -I48 -0.0521632845195872 I88 -Y135 -0.0527973888551738 K35 -F40 -0.0529073707246761 F44 -G52 -0.0542072926324393 A116 -L125 -0.0559758956879879 S34 -Y39 -0.0600295651958426 L89 -G124 -0.0622932453000198 S90 -S115 -0.06262092548711 I94 -G131 -0.0630428434003814 A45 -L53 -0.0631939364515763 L125 -A134 -0.0645100849290472 V92 -A130 -0.067934208542312 V123 -A130 -0.0679470474942709 C84 -F91 -0.070366725085532 F87 -N93 -0.0705071427172047 S115 -Q127 -0.0720033133896956 E86 -I94 -0.0730367837709025 S90 -A116 -0.0738670074522831 A42 -A51 -0.0738980875831212 F91 -G131 -0.0739223899510475 I48 -L53 -0.0740277590904768 L118 -L125 -0.074263259422259 L89 -Y135 -0.0747140361659753 A116 -I128 -0.0762596373417868 E86 -Y133 -0.0780307168584882 F40 -I48 -0.0785713173540872 E86 -I128 -0.079656068126102 C84 -F117 -0.0804175141128125 S36 -I41 -0.0818184942123565 L89 -T122 -0.0825192910173627 L37 -A45 -0.0831006263733181 A116 -Y133 -0.0851697153280268 A85 -Y135 -0.0860109785846869 L125 -Y133 -0.0864561546225102 A116 -G121 -0.0870384177902572 L89 -I128 -0.0884072626181436 F87 -G131 -0.0902523597107319 V92 -G132 -0.0919669100757616 L89 -T97 -0.0956991875447306 I41 -I48 -0.0975825518400697 L33 -F40 -0.0988569386360296 F95 -S115 -0.0992347708589045 L125 -G132 -0.100465005022127 I41 -G46 -0.100971656850859 I119 -L125 -0.101758047747671 S120 -T126 -0.102497098965258 N93 -G132 -0.102760667916116 F87 -Q127 -0.10315067393341 I41 -G50 -0.103253595663905 T97 -L129 -0.103328851700867 L89 -G121 -0.103690595831547 V38 -G47 -0.103744681637722 F91 -L129 -0.104922804952963 L37 -G46 -0.104930916748793 L89 -A116 -0.105521092204976 G121 -G131 -0.105946522192555 F91 -G121 -0.105985511853615 L83 -V92 -0.107336589319945 E86 -A130 -0.107554951524442 F117 -G131 -0.107975354407637 I88 -G132 -0.108171661328797 F95 -S120 -0.110702812600874 T122 -L129 -0.110786085011131 V96 -G124 -0.111961967319567 S34 -A42 -0.11214764009019 S90 -L125 -0.11381987482608 F44 -G50 -0.114175932334901 S36 -Q43 -0.116141824622752 F87 -V96 -0.116607915412176 I94 -T122 -0.117360035102433 F95 -L129 -0.117585472911519 A85 -S90 -0.118418325337008 F117 -G132 -0.119068425534085 I94 -A116 -0.120727077519572 F87 -F95 -0.121142301500575 V92 -T126 -0.121760335596575 F44 -L53 -0.122207603267271 G46 -G52 -0.123063806494117 F117 -I128 -0.123078807410483 L83 -F117 -0.123152998531729 N93 -S115 -0.123265495055914 G121 -T126 -0.123720724438521 S115 -G121 -0.124787693591601 A42 -V49 -0.12615560962402 T126 -A134 -0.126910111448509 S115 -G124 -0.12717533185276 F40 -V49 -0.127632319102469 G47 -L54 -0.127875348089852 S120 -A134 -0.128609894621948 K35 -F44 -0.129279893994186 L89 -T126 -0.12982933363446 L37 -F44 -0.130203734851192 I119 -G132 -0.131108331048566 T126 -Y133 -0.133033853174905 I119 -I128 -0.133460762535066 E86 -F95 -0.134787955505133 A85 -I94 -0.134856254721025 F44 -A51 -0.137023066576984 F91 -A116 -0.137412339932982 L89 -S115 -0.143256072830572 T97 -Q127 -0.144816418416781 L129 -Y135 -0.145589346513292 S120 -G132 -0.146201627962213 F40 -G46 -0.147017645859913 T97 -I119 -0.147750936868581 S90 -Y135 -0.149308535983319 N93 -V114 -0.15135146129251 A85 -V92 -0.151564866748132 L83 -F91 -0.152277731304562 G46 -L53 -0.153038042981899 V38 -A45 -0.153963932532134 I88 -S120 -0.155707181758335 Y39 -A45 -0.156877274631274 L118 -G124 -0.157880710875603 Y39 -F44 -0.158616748075771 V96 -F117 -0.159931150639469 N93 -T126 -0.161527051771893 V38 -G46 -0.162932527009072 F40 -G47 -0.164186918748271 I94 -I128 -0.164685768569157 A45 -L54 -0.165570521308625 I88 -A134 -0.165811659477264 L33 -Y39 -0.165931683556569 C84 -V92 -0.166023938401197 I41 -V49 -0.166592354432343 T97 -S115 -0.166603569738864 F91 -Y133 -0.171014135200197 L89 -Y133 -0.171276812622037 I119 -Y135 -0.171602190171197 F95 -T122 -0.176275767360217 S34 -F40 -0.177248091979365 F87 -Y135 -0.177281080270565 N93 -I119 -0.178696635732578 F87 -I94 -0.178967860730653 L89 -V96 -0.181084743328408 S120 -Y133 -0.185370749774695 V96 -L125 -0.186200916840133 V92 -G121 -0.187042452277494 V96 -I119 -0.187294723656452 I48 -L54 -0.196843241816975 L83 -Y133 -0.197168922935569 S90 -F117 -0.198364255150199 V96 -S120 -0.200164969022255 G124 -L129 -0.200480983114055 S36 -A42 -0.200912638164178 T97 -V114 -0.202018212167721 I128 -Y135 -0.204864558960935 F87 -S120 -0.205126058644957 F95 -I119 -0.20629918143179 A45 -A51 -0.209023888318431 Q127 -G132 -0.209814196834837 I88 -V96 -0.21031362089246 S90 -T97 -0.210755802774891 V92 -T97 -0.211482335226314 A116 -Q127 -0.213176194641525 E86 -T126 -0.213938332175348 V123 -L129 -0.214805159079801 S115 -I128 -0.215149444796318 A85 -F91 -0.216384376290502 L118 -V123 -0.219133861967322 L83 -S90 -0.219974094194017 S90 -T126 -0.227288059573145 V96 -T122 -0.230037486363537 V96 -L129 -0.230664511673556 L83 -I88 -0.231652179228213 I88 -A130 -0.231871113495341 I128 -Y133 -0.232238134667748 L118 -G132 -0.233638436662545 L89 -I94 -0.23485167731809 I88 -F95 -0.235139870732388 I94 -Q127 -0.235343827582412 F87 -V92 -0.235661498685585 T97 -L118 -0.236233518100786 L125 -G131 -0.236349232732729 N93 -I128 -0.237696911531092 T97 -S120 -0.239090664982772 T97 -G124 -0.239954745421828 T126 -G132 -0.241256793390934 I88 -A116 -0.243846765745587 A85 -A130 -0.247915732591103 F87 -L118 -0.249017585705976 N93 -L125 -0.251324249449299 N93 -L129 -0.25173992526955 F87 -F117 -0.258813097025021 F95 -T126 -0.260999903615944 S90 -G121 -0.265742571484486 I94 -F117 -0.266805825035632 I94 -I119 -0.267833071762786 L89 -G131 -0.268977720118063 G124 -A130 -0.269566538062722 G47 -L53 -0.271538060325009 I41 -G47 -0.272612282691895 F95 -V123 -0.280039782895386 F117 -A134 -0.281435538610422 L129 -A134 -0.283749357296244 V92 -Q127 -0.284503360533692 S90 -F95 -0.286612701381358 L89 -Q127 -0.286817469757791 E86 -N93 -0.288996503063597 A85 -Y133 -0.289640144840571 L37 -A42 -0.289908796440162 C84 -N93 -0.292421979485346 E86 -V92 -0.295337390142141 S120 -A130 -0.297619213662016 F91 -V96 -0.298098891972864 V114 -S120 -0.300339640026737 V114 -A130 -0.301035621899505 K35 -A42 -0.301501893291551 Q43 -I48 -0.309654295370442 V49 -L54 -0.31853543591728 I128 -A134 -0.320826159830637 F44 -V49 -0.331601464177549 C84 -Y133 -0.333299616852158 A42 -I48 -0.339963358860558 T126 -G131 -0.340890231249548 I94 -T126 -0.341400654706264 F40 -A45 -0.341753327212803 V92 -V114 -0.347561584951056 K35 -I41 -0.358185341070235 S90 -V96 -0.364648994914138 F95 -V114 -0.36545824656117 L33 -V38 -0.367348035635035 V38 -F44 -0.370537641413373 L89 -L129 -0.370949957634567 I88 -I94 -0.377503139347455 I94 -L118 -0.377583900820885 T122 -I128 -0.38390078885998 L83 -L89 -0.386353225283939 E86 -F117 -0.386865052703734 L37 -Q43 -0.401864095765596 G47 -G52 -0.408065440972636 A45 -G50 -0.409029739295101 G46 -A51 -0.414013337065877 V96 -Q127 -0.427565314686827 A42 -G47 -0.435383613859241 V114 -L129 -0.449936201575388 Q127 -Y133 -0.451283392433312 V96 -L118 -0.455046232226285 Q43 -V49 -0.456412497954996 S90 -A130 -0.457732294094914 F91 -T97 -0.465000803880944 C84 -S90 -0.537966568874998 N93 -G121 -0.565342997696151 N93 -S120 -0.582132775714679