[Fri Aug 26 17:20:52 2016]
>Input file: TMD3HKS4M1D.pdb
>TM segments:  41-74

MAIDEN score = -10.2881

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
S58 -L63   		0.467411634880455
L44 -A49   		0.353745499409474
S58 -A66   		0.280698276404662
G48 -Q56   		0.236521783213211
R50 -H55   		0.22102563802556
R43 -A49   		0.20759080568852
S42 -M47   		0.187931138338994
F65 -L70   		0.184191081388612
A66 -I73   		0.177459684683599
M47 -H55   		0.161416293630488
A53 -S61   		0.126626489656218
N57 -L62   		0.125054422876309
K45 -A53   		0.122015864904711
I67 -A74   		0.120820939122584
H55 -L63   		0.110823060527108
Q56 -I64   		0.102389877105827
A49 -S58   		0.10015925204223
I64 -A71   		0.0983996394399398
N57 -I64   		0.0980929322408315
L44 -L52   		0.0974958683845619
R43 -R50   		0.0814880961639779
L62 -A72   		0.080909565319498
A49 -N57   		0.0742119085137469
L63 -L70   		0.067922000812791
H55 -I64   		0.0628850512666174
E60 -I67   		0.0621729290924038
A54 -L62   		0.0468391950501061
A66 -A74   		0.0454985978798468
Q41 -G46   		0.0448279866036856
F59 -I64   		0.0441037283242647
S61 -A69   		0.0398508925814918
L44 -A53   		0.0384516291609982
L63 -A71   		0.0368891471297959
G48 -N57   		0.0363935867689915
G48 -H55   		0.0342548089742429
S42 -G48   		0.0323656369352152
G46 -A54   		0.0316699742302182
L52 -N57   		0.0241642788872215
E60 -F65   		0.0199463533390478
N57 -F65   		0.0197767335658483
G46 -H55   		0.0185463076859729
A49 -Q56   		0.0175875351776962
A54 -L63   		0.0108066560344273
H55 -E60   		0.0105147188081687
I64 -A72   		0.00420588415813389
I64 -A69   		-0.00122433823792356
L52 -E60   		-0.0105540883262309
L62 -I67   		-0.0108104107853855
K45 -A51   		-0.0178899518164255
A53 -L62   		-0.0190407938266253
A51 -E60   		-0.0310855415249411
R50 -S58   		-0.0322126076447637
A51 -Q56   		-0.0333839681412491
S42 -A49   		-0.0382822471244326
Q41 -G48   		-0.0383872513798984
A51 -S58   		-0.0400099563297776
F65 -I73   		-0.0488416909901899
R43 -L52   		-0.0529348553462593
S61 -A68   		-0.0538518920497104
F59 -I67   		-0.0551837613850372
S61 -L70   		-0.0621196588496398
N57 -A66   		-0.0647499366345499
S61 -I67   		-0.0657574163429331
S58 -F65   		-0.0662105342908299
E60 -A68   		-0.0684510446069847
A49 -H55   		-0.0714979361723884
S58 -I67   		-0.0789975044882948
L63 -A72   		-0.0792629815150949
Q41 -M47   		-0.0835577329263653
A51 -F59   		-0.0884899322301225
E60 -A69   		-0.0904853395263587
S61 -A66   		-0.0961317342585595
G46 -A53   		-0.102610225771036
M47 -Q56   		-0.104061003934391
L44 -A51   		-0.106111903976801
R43 -G48   		-0.10742672023928
A51 -N57   		-0.108385014095372
Q56 -F65   		-0.109375882975066
H55 -S61   		-0.112354620503714
G48 -A54   		-0.112749130499242
A54 -S61   		-0.11511044186698
E60 -A66   		-0.121363461850849
F59 -A66   		-0.124532054780134
R50 -N57   		-0.12620511143657
L52 -F59   		-0.129633018017342
L62 -A71   		-0.133566010559449
R50 -F59   		-0.135476752524577
L52 -S61   		-0.13744134825068
K45 -R50   		-0.137500171777354
L44 -R50   		-0.139186534727925
F65 -A72   		-0.139579564019328
A54 -E60   		-0.143746502537972
R50 -Q56   		-0.14684240667043
Q56 -S61   		-0.153814851740173
K45 -A54   		-0.158438672979727
I64 -I73   		-0.165688247877369
L62 -A69   		-0.166563503705129
M47 -A54   		-0.168100830545079
L63 -A69   		-0.168367178838352
F65 -A74   		-0.171745020589915
F59 -F65   		-0.172000998386065
A66 -A72   		-0.172590114236811
K45 -L52   		-0.173207236079085
F59 -A68   		-0.178566294680558
Q56 -L63   		-0.184653640841676
A68 -A74   		-0.204209213042761
L62 -L70   		-0.218405806952694
A53 -F59   		-0.229472348288734
L63 -A68   		-0.234004834943585
H55 -L62   		-0.250625993144356
N57 -L63   		-0.254889817101164
A53 -E60   		-0.271600177604448
F65 -A71   		-0.281566443832362
L62 -A68   		-0.31212048260225
I67 -I73   		-0.314101435901875
G48 -A53   		-0.315610478044571
A66 -A71   		-0.320105483767269
A49 -A54   		-0.321007205686308
G46 -L52   		-0.33640912927383
L52 -S58   		-0.338686653016412
S58 -I64   		-0.353238643588367
A68 -I73   		-0.369271655546276
M47 -A53   		-0.379045631618706
M47 -L52   		-0.386924677717309
A54 -F59   		-0.387749876607598
A69 -A74   		-0.39856566230693
I64 -L70   		-0.400540680511953
I67 -A72   		-0.451698276751209
G46 -A51   		-0.479227548915557
Q56 -L62   		-0.50405374548826
A53 -S58   		-0.514735899624848