[Mon Aug 29 17:27:07 2016] >Input file: TMD3MQV7M1G.pdb >TM segments: 316-329_ 368-388_ 415-422 MAIDEN score = 35.4725 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K380 -V385 10 H379 -V385 10 F324 -K380 2.20179406759688 I322 -I381 2.01193353246623 I322 -S382 1.39467143827697 D378 -V385 1.32690924468753 F325 -K380 1.17638187713023 F324 -H379 1.01889422882529 F324 -I381 0.957901127944367 A326 -V385 0.836190044432119 K380 -L386 0.826808313364907 F325 -V385 0.755170261001241 F324 -V385 0.707303066838344 H379 -P384 0.694226909640762 F325 -P384 0.675413060230472 D378 -L386 0.674006677583735 K380 -M387 0.600801634580712 F324 -P384 0.546264809837901 I322 -Y383 0.484232163107752 F325 -D378 0.479277544098424 F325 -H379 0.478294206958815 F324 -D378 0.476150053519545 I322 -K380 0.470777285377171 H379 -L386 0.464655530614847 N323 -K380 0.442327991229849 D378 -P384 0.424262348314898 A326 -K380 0.419626024133914 I381 -M387 0.409473576110813 F325 -Y383 0.396019758232374 N323 -P384 0.377561720071241 A326 -L386 0.369599879007084 C329 -K374 0.365101674820571 N323 -H379 0.355016967721318 A326 -K373 0.326925518428375 C329 -D368 0.313303730876401 A326 -S382 0.289323915818376 F324 -C329 0.288588332761787 T327 -E370 0.282274426283776 F324 -S382 0.278729056927176 C329 -V385 0.273659098309852 A326 -G420 0.257802726857407 K377 -V385 0.254668539329513 V319 -Y417 0.239409658314214 W328 -K377 0.233359171875665 F321 -S382 0.225340817494024 I381 -D388 0.221857765857562 F324 -Y383 0.220811916152487 H379 -Y417 0.210787476801582 A326 -K374 0.206070388286568 F324 -G421 0.200696410849709 K318 -Y415 0.194159048911197 K377 -E419 0.186220852489975 K373 -D378 0.182637498852999 H379 -M387 0.181486349943206 T327 -I376 0.179061070590666 A326 -E419 0.178983766342425 H379 -G420 0.176206602302554 N323 -M387 0.175299391936393 T327 -P384 0.171335432818208 F321 -K380 0.169341221155558 W328 -H379 0.165509553349385 F325 -I381 0.160077491662488 I322 -M387 0.153392870739035 W328 -M387 0.146200626199452 Y417 -I422 0.142100684669501 I381 -E419 0.140180791094636 N323 -E419 0.135947605649699 N323 -Y417 0.133694639376274 T327 -G421 0.12621630946017 T327 -H379 0.125419746192797 T327 -V385 0.125363339452524 N323 -A416 0.123766497235126 W328 -K374 0.120049468182706 D368 -K373 0.1149189276589 K380 -Y417 0.113951549388658 I322 -H379 0.108038767426414 I322 -G421 0.106982997795647 F321 -Y383 0.103013837461367 C329 -L369 0.102708212243029 I322 -G420 0.101546340903677 W328 -K380 0.0985755376137303 A326 -G421 0.0983797608822957 K374 -L386 0.0975331819911971 N323 -G420 0.0933563467931631 F324 -D388 0.0905312229708803 F324 -K377 0.090169122326313 V385 -G420 0.0868717678881823 T327 -S382 0.0839773344359495 I320 -Y383 0.0800133642416254 N323 -L386 0.0787097375086381 A326 -I418 0.0735078462106948 K380 -D388 0.0722752365406031 I322 -A416 0.0683545441162354 N323 -I381 0.0678506900102884 I322 -L386 0.0636288167824501 F325 -K377 0.0635391647723502 F321 -P384 0.0633703379035627 C329 -G420 0.0628756753894191 V319 -S382 0.0609458361522726 N323 -Y415 0.0604179468026395 Y383 -D388 0.0585512902975891 W328 -G420 0.0568351376205678 F325 -L386 0.0547470143404771 C329 -F375 0.0506227310121909 P384 -G420 0.0498896907017539 T327 -G371 0.0493756010655986 F324 -Y417 0.042708742103116 I376 -M387 0.0415398897321921 T327 -K380 0.0403968200711686 D378 -Y383 0.0396307078046876 F375 -P384 0.035551924186676 A326 -D378 0.0323724218180521 T327 -K373 0.029912993004964 F375 -M387 0.0277492435389228 K374 -V385 0.0250907073352247 K377 -L386 0.0183515841230513 F325 -I422 0.0180108782190516 I320 -A416 0.0166805623799395 K377 -G420 0.0159133413212536 N323 -G421 0.0145763829704895 N323 -Y383 0.0121408474900706 K380 -I418 0.00981189162425267 A326 -K377 0.00833124537751045 K377 -P384 0.00795452494072535 V319 -A416 0.00751477211724561 E370 -F375 0.00702347742696779 A326 -I376 0.00624030489230787 D378 -G420 0.00391372162852077 A326 -I381 0.0036651914391328 I320 -S382 0.00260720165455286 F321 -E419 0.00094550442672392 T327 -V372 5.39248959653404e-05 N323 -D378 -0.00076459183862676 C329 -G421 -0.00146897138658808 T327 -I381 -0.00246070992553449 K374 -H379 -0.00688642911781834 A326 -D388 -0.00694197079295567 K380 -G420 -0.00913759669221287 D378 -G421 -0.00917384270820731 H379 -I418 -0.0102719348499889 W328 -D368 -0.0104414324465936 I322 -V385 -0.0109677420317764 A326 -M387 -0.0132572459644948 F321 -I418 -0.0134660714607411 V385 -E419 -0.0142765808530072 F325 -F375 -0.0188846200138109 S382 -E419 -0.020489568124435 A416 -G421 -0.0230442700750002 H379 -D388 -0.0290149438742864 F375 -L386 -0.0302542521782643 K373 -V385 -0.0307500059198196 F321 -Y415 -0.0313310671851923 W328 -D378 -0.0334543743401271 C329 -L386 -0.0343557182799934 F325 -Y417 -0.0348693148057611 I381 -I418 -0.0360028249830631 I322 -D378 -0.0372925856481783 F321 -G420 -0.046020273103494 T327 -G420 -0.0464645775874668 W328 -Y383 -0.0472370872689891 T327 -K374 -0.0488512584972756 H379 -E419 -0.0489725820002782 S382 -I418 -0.0498650492259802 D378 -E419 -0.051929335218321 I322 -E419 -0.0555534161383977 I322 -D388 -0.0567418587297006 D378 -I418 -0.0609169817665136 V319 -I381 -0.0622354071385169 F325 -D388 -0.0636546534916282 T327 -K377 -0.0657465341370423 C329 -G371 -0.0719747260508825 I320 -Y417 -0.0723911271305395 F325 -I418 -0.0750981988899446 T327 -F375 -0.0759349914953074 D378 -M387 -0.077142777978918 K380 -E419 -0.0811016604789483 S382 -Y417 -0.0844006640309507 W328 -L386 -0.0874774437784094 W328 -V372 -0.0901260568158631 F324 -I422 -0.0957814927624638 I320 -I418 -0.0959206072146381 I381 -Y415 -0.0982907442926324 T327 -D378 -0.0992526759498884 N323 -I422 -0.101647819095611 C329 -V372 -0.104390854397378 K316 -F321 -0.104951905987942 S382 -D388 -0.106715751465088 A326 -F375 -0.106892386961347 K377 -Y383 -0.10710411100488 I381 -G420 -0.109340277279247 W328 -G421 -0.11143062053867 T327 -D388 -0.115852508994827 W328 -P384 -0.117226319716495 A326 -D368 -0.117754396936268 F325 -I376 -0.118254087820291 I376 -L386 -0.119671655522828 I376 -P384 -0.119690873745117 G317 -I322 -0.120919166975896 I320 -K380 -0.122507024039866 T327 -Y383 -0.122557166152545 F321 -G421 -0.123982073197552 T327 -L369 -0.125749109338209 W328 -I376 -0.125895594774108 F324 -G420 -0.129766510539337 F321 -A416 -0.13346883137157 N323 -D388 -0.138833136421738 W328 -E419 -0.138913408119234 K380 -G421 -0.140059000898934 I381 -A416 -0.143562644449513 D378 -D388 -0.144781510714813 I322 -Y417 -0.145541940626235 I322 -I418 -0.14693820037153 W328 -L369 -0.147611272706964 F325 -G421 -0.149028572313373 F321 -Y417 -0.150096669481674 T327 -L386 -0.152960291682454 K318 -A416 -0.161719640234149 F375 -V385 -0.162737093339221 W328 -V385 -0.164349506854513 F324 -A416 -0.164510417517732 C329 -P384 -0.173547136359923 A326 -H379 -0.174729259138322 F325 -G420 -0.177223981129116 W328 -E370 -0.177853016739409 C329 -K373 -0.18640624699598 K377 -M387 -0.187774027992859 I376 -V385 -0.189690137685437 S382 -M387 -0.192722917665461 I322 -Y415 -0.194000201401786 W328 -G371 -0.195992005343014 T327 -D368 -0.198279870513614 I381 -Y417 -0.198754992918849 F324 -I418 -0.199172996083532 L369 -K374 -0.201707268251214 F321 -I381 -0.216710031671453 K373 -L386 -0.226751282330807 I320 -Y415 -0.240932949450925 I322 -P384 -0.247206179252219 W328 -K373 -0.252506618499274 N323 -V385 -0.255041944016632 N323 -W328 -0.258543545290395 F325 -M387 -0.263873268857534 A326 -P384 -0.272126283926177 F324 -L386 -0.272692034443298 D378 -Y417 -0.283925853089913 F325 -S382 -0.28803138851726 A326 -Y383 -0.290351662393749 C329 -D378 -0.298347503755104 F324 -M387 -0.306042906587442 I320 -I381 -0.30626801003645 N323 -I418 -0.317510317000068 T327 -M387 -0.328200798754106 P384 -E419 -0.349667242167107 W328 -F375 -0.3676155956393 V319 -Y415 -0.38200233205108 F375 -K380 -0.382997560382902 F324 -E419 -0.399410417451421 I381 -L386 -0.41806136063377 C329 -E370 -0.448001932572442 F325 -E419 -0.448213394840413 N323 -S382 -0.490912756771208