[Fri Aug 26 17:30:20 2016] >Input file: TMD4ADC8M3D.pdb >TM segments: 422-428_ 437-450_ 457-485 MAIDEN score = -8.1017 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C461 -R467 1.19761463855995 C475 -E480 1.18884584293323 I477 -L483 1.13084100157054 H460 -R467 1.09260813729722 I477 -V482 0.990350736395246 R423 -V445 0.858017699900112 L439 -C475 0.750588467505904 E444 -M449 0.679197936982842 R423 -N446 0.667850201706814 L439 -A474 0.663998664135865 L476 -I481 0.661460850040664 F441 -D447 0.52111528807909 K443 -M449 0.477978273371342 L439 -M471 0.47268357807847 N446 -A458 0.465373620524693 I425 -M438 0.405796076748922 S442 -M471 0.390328443277865 I459 -R467 0.376634850971874 G466 -C473 0.369713766785786 C473 -A485 0.352649458658581 K443 -A478 0.348486119188687 N446 -I459 0.346632564129743 K443 -A458 0.344541472579344 E437 -C473 0.338279557009779 W448 -V457 0.322412478616524 R423 -D447 0.318673080673908 A458 -G469 0.316195879929262 E444 -C473 0.313409920396741 M449 -V472 0.307169652402586 L476 -L483 0.300880375277026 D447 -C475 0.292536537452094 S442 -H460 0.289186019604226 H460 -K465 0.288906633819372 I459 -V472 0.284853872512016 R423 -M471 0.279238531393095 R467 -C475 0.274539833722249 I459 -T468 0.268603735901948 R423 -A450 0.264153241370546 A474 -A485 0.263794604484387 M438 -K443 0.262470091040588 V445 -V457 0.262374748099796 I425 -C475 0.260007375884843 K443 -A474 0.258836639387646 I425 -S442 0.255773878959358 R467 -V472 0.251104373611745 M438 -R467 0.249432542583798 H460 -C473 0.247861426398832 M426 -H460 0.245671026382121 R423 -M449 0.245610027752541 K443 -M471 0.245044742801507 R424 -K462 0.234742366040951 R423 -I459 0.234226030077881 F441 -A474 0.228567040858056 R424 -M471 0.223276057477911 I427 -G466 0.217076376230731 D428 -M471 0.216973225327355 S442 -A458 0.216031274350527 V422 -S442 0.212849743809823 I477 -A485 0.203621064094927 R424 -K443 0.189202107257339 G463 -T470 0.187564150105874 G466 -C475 0.184896289661363 R467 -A474 0.18447273331524 F441 -C473 0.183251115650979 T470 -A478 0.180299273367402 L476 -N484 0.180051879478913 S442 -C475 0.179268831835418 R423 -D428 0.176214414050394 M426 -L440 0.167793353247179 G466 -A485 0.163620686768321 A458 -G466 0.161917646632176 K462 -T470 0.161688797749849 V472 -E480 0.161615348816412 D447 -A474 0.159413737657978 D447 -A478 0.159386759972658 I427 -I459 0.158874260862184 G464 -C473 0.157810814798893 C475 -N484 0.151766444837163 M438 -N446 0.146991365157934 R424 -A458 0.146935171254753 I425 -E444 0.146738330329679 M471 -A485 0.145065177649305 A458 -G464 0.144505212530286 S442 -V472 0.144429329463454 L439 -T468 0.144332491118927 A458 -R467 0.14389009533364 K443 -T468 0.141402676382778 S442 -C461 0.137151764629042 S442 -T470 0.137097156803791 M426 -V445 0.133569563611557 W448 -M471 0.132524454881208 S442 -A478 0.131452081992416 D447 -I459 0.130172471783265 V422 -H460 0.130081753504687 M438 -C461 0.127972810236357 K462 -G469 0.127342721941525 E437 -E444 0.124876791759744 I425 -K443 0.120538530216435 M449 -I459 0.11915167082047 S442 -C473 0.118131939369935 I459 -M471 0.115940230076131 S442 -L476 0.115858348784274 A450 -V457 0.11573810145061 E444 -E480 0.113785118975543 L440 -W448 0.113527130110457 R423 -R467 0.112559779988936 I427 -G464 0.111095283619252 R423 -S442 0.109609779058222 I427 -G469 0.109445169940345 G466 -A474 0.106211510018864 V472 -V482 0.105967005630806 A458 -M471 0.104388011545576 L439 -M449 0.10006246472542 E444 -A474 0.0987917267826708 R424 -T468 0.0985746498054854 I427 -R467 0.09315183533562 I427 -H460 0.091013514877035 I459 -C475 0.0898610082830037 L440 -I459 0.0890169669960847 N446 -V457 0.0885422072023543 I459 -C473 0.0880747409772784 D428 -E437 0.0869281147888197 A458 -C475 0.0842211653986514 E444 -A450 0.0840487520378894 M426 -R467 0.0838020333201648 V457 -G469 0.0835359697170451 M438 -I477 0.0832547592777066 D428 -T468 0.0832288375168231 R424 -L440 0.0830934818775904 V422 -M449 0.0830634657468501 V445 -A458 0.0819679726282256 V457 -M471 0.0796733578949436 L440 -I481 0.0778910413336296 M449 -A458 0.0770003445885065 V422 -A450 0.0769493131611236 G469 -A478 0.0766884043113052 K443 -V472 0.0765334921306859 A458 -L476 0.0762114565351748 M426 -T468 0.0753476834783953 F441 -A458 0.0723526249573041 E437 -M471 0.0714117458651613 I425 -T470 0.0704357318959152 E444 -V457 0.0702603974135019 R423 -T468 0.0693095168069467 T470 -S479 0.0685654516163141 A450 -H460 0.0679244241123458 M426 -M471 0.0659659085360866 V445 -S479 0.0659070782673816 E437 -T470 0.0655997483840123 V457 -C473 0.0653920702482272 M438 -T468 0.0652194476150654 S479 -A485 0.0651287603224056 A450 -L476 0.0643466848398209 S479 -N484 0.0637836504288289 R424 -V457 0.0637254316416906 V472 -N484 0.0631803902060095 M426 -E437 0.0612808786712411 V457 -T468 0.0612544894260942 K443 -H460 0.0601706058286755 C475 -V482 0.0596850030278644 M449 -L476 0.0593181581858822 I427 -L440 0.0573617814157625 V445 -A450 0.0571409636478339 K443 -T470 0.0561069739673266 F441 -I459 0.0552848097082094 G464 -V472 0.0552171632277929 N446 -V472 0.0521915644208371 I459 -L476 0.0519477692553343 N446 -G469 0.0518646321738023 A450 -C475 0.0516283666538997 D447 -M471 0.049595321558543 D447 -T468 0.0494204361002408 A450 -I459 0.0488287351054444 I425 -N446 0.0471428817956649 V422 -V445 0.045475973659677 T468 -I477 0.0450594444451302 V422 -C461 0.0450070419089403 C473 -I481 0.0447362023841924 S442 -S479 0.0439804595670537 E444 -I459 0.0437572997994966 E444 -L476 0.0427224493167042 E437 -C475 0.0400695083177158 T470 -N484 0.0395276824074728 V422 -N446 0.0392275875077752 M426 -T470 0.0391578234528214 W448 -I477 0.0382382589981531 L440 -S479 0.0378041902828532 C475 -A485 0.0344333143906383 T468 -L476 0.0342506291617823 S442 -R467 0.033754590789461 S442 -G469 0.0323964593013431 N446 -S479 0.0314866177383619 M438 -E444 0.0297098294306987 L440 -T470 0.0293661357271038 L439 -S479 0.0291757450806442 R424 -A450 0.0287379869607518 M426 -I459 0.0270492929151125 M438 -C475 0.0264608788579275 H460 -A474 0.0247861937121483 A450 -S479 0.0245211499368239 L439 -I481 0.0239231656512287 M471 -S479 0.0234089524880201 V472 -A485 0.0224500695315202 F441 -V457 0.0223364964790296 N446 -H460 0.0218885817863335 I459 -G466 0.0210394515098481 A458 -T470 0.020403592515613 K465 -V472 0.0193285480204444 V472 -I481 0.0185847786174744 I425 -I459 0.0185262303201021 E444 -S479 0.0175094788738361 E444 -V472 0.0172768345206012 D447 -T470 0.0170989390554843 K443 -I481 0.0170470535708072 V445 -I459 0.0168379407096886 L440 -L476 0.0165796565498377 K443 -L476 0.0163301467307235 K443 -G469 0.0156743201465194 I427 -F441 0.015425912824635 M438 -A478 0.0142863840992344 R423 -E444 0.0140196265403261 L439 -G469 0.0132208010610988 L439 -A485 0.0127212910792363 M438 -G469 0.0117519513635234 V422 -E444 0.0102933601013504 I427 -A474 0.0100058107497256 K443 -A450 0.00988405262405845 V445 -A474 0.00946417154566248 G464 -M471 0.00946391945296821 G463 -V472 0.00930493269220989 L476 -V482 0.0071929287539696 D447 -E480 0.00713102773743834 L440 -T468 0.00449093849454674 K443 -V457 0.00293700120266571 L440 -C473 0.00286964865028683 I477 -N484 0.00209936074339012 N446 -A474 0.00184375677100457 A474 -V482 0.000201335775573019 I425 -A458 -0.00449181528399256 I425 -K462 -0.00526889780516537 L439 -C461 -0.00561758865812922 F441 -A450 -0.005945983203548 M438 -L476 -0.00604199297312036 W448 -A474 -0.00609705492143245 G469 -I477 -0.00682504290532426 V445 -A478 -0.00798709552290067 M438 -W448 -0.00804000983125208 F441 -V472 -0.00808574201096413 H460 -C475 -0.00916929382733334 M471 -A478 -0.00962820780330809 I425 -L439 -0.0110906911875404 E437 -T468 -0.0124695231166028 I427 -S442 -0.0125869097095871 I425 -V472 -0.0133342527674225 R424 -G464 -0.0181405901567544 K443 -I459 -0.0188196273660708 M426 -S442 -0.0192487708653539 G466 -M471 -0.0195117093016464 V422 -I427 -0.0207684025189767 M438 -H460 -0.0217873349472688 G469 -A485 -0.0242714647121964 L439 -L476 -0.0244125239706059 H460 -T470 -0.0254398156097744 C461 -V472 -0.0256866930207043 A458 -C473 -0.0285864544622803 M449 -V457 -0.0287423108873032 D447 -I481 -0.0288771882025562 A458 -G463 -0.029080981508093 V457 -S479 -0.0294105573418495 L439 -H460 -0.030237627390485 D428 -G464 -0.0306993287059618 L439 -N446 -0.0333969424468576 D428 -T470 -0.03526286536228 M449 -A478 -0.0355939422617553 M471 -I481 -0.0357367712410515 V472 -L483 -0.0366121071111163 N446 -T468 -0.0368244845521306 I425 -V445 -0.0390802093267295 M438 -T470 -0.0403062660441349 K443 -E480 -0.0425420936181604 R423 -K443 -0.0433402422675373 R424 -L439 -0.0434712817420762 F441 -I477 -0.0454289367738614 E437 -S442 -0.04543535087147 R424 -E437 -0.0459999522760484 G469 -S479 -0.0462049441348886 D447 -A458 -0.0469548846522261 D447 -C473 -0.0473036270705642 L440 -N446 -0.0475506354007176 V457 -G464 -0.047787955197828 G464 -G469 -0.0488635645315894 L439 -R467 -0.0489034022997457 M438 -I459 -0.0505107782977238 E437 -A478 -0.0510942140634705 A450 -V472 -0.0512208430276506 L439 -I459 -0.0512224429974273 F441 -C475 -0.0524404911830749 D447 -I477 -0.0530762699585665 V445 -M471 -0.0542734527531108 M426 -C461 -0.0559892361524765 F441 -N446 -0.0561603674570663 W448 -A458 -0.0566518194059951 M426 -L439 -0.0574924698749699 F441 -S479 -0.058325222263405 D447 -S479 -0.0586892799941507 V457 -V472 -0.0596918411464751 R423 -L439 -0.0617122783361621 W448 -S479 -0.0629479737348337 I427 -K462 -0.0634085607183077 M438 -V472 -0.0639159299197345 I425 -E437 -0.0649836774836956 C461 -T468 -0.0650202524289923 L440 -A474 -0.0651067167720969 F441 -T470 -0.0660272572290808 V445 -V472 -0.0692816471836499 I459 -A474 -0.0698682415459535 I427 -G463 -0.0699159975186472 F441 -A478 -0.0702014004076954 W448 -L476 -0.0711451724091701 N446 -A478 -0.0719233753808196 D428 -K462 -0.0729085012426762 R423 -W448 -0.0734105845199133 N446 -C475 -0.0741232699018206 K462 -V472 -0.0748836960812183 H460 -M471 -0.0752247793618923 L439 -I477 -0.0756770825900799 I459 -G469 -0.0759609637086704 S442 -T468 -0.0762587463283042 I425 -L440 -0.0781475915372345 R424 -R467 -0.0805185907431721 M426 -F441 -0.0810129201143113 I427 -L439 -0.0814110877235263 I427 -M438 -0.0820786753085549 S442 -W448 -0.0823863901684132 R423 -F441 -0.0825179499957547 D428 -R467 -0.0825363935947703 S442 -I477 -0.0871151780996073 V422 -D447 -0.0871451627033153 I459 -K465 -0.0873364509115975 E444 -A458 -0.0875574291914663 C473 -L483 -0.0882592220066858 A478 -L483 -0.0885206915526631 A458 -T468 -0.0885388069165554 C473 -N484 -0.0900944533437449 R423 -M438 -0.0906047222158257 D428 -G466 -0.0906255501159352 C461 -C473 -0.090710756616982 R467 -L476 -0.0913426321443973 E437 -A474 -0.0921238337900245 R423 -E437 -0.092381714787205 T468 -C475 -0.0929048966614552 D428 -G463 -0.0931718520831981 K443 -S479 -0.0933722189887733 I427 -K465 -0.0942688692776197 R424 -S442 -0.0947479141555114 V422 -F441 -0.0953678726076905 M471 -L483 -0.0965783725717371 I425 -D447 -0.0995379301946297 W448 -V472 -0.102811136005396 L440 -M449 -0.103020663775578 L440 -C475 -0.103682970210374 V457 -L476 -0.104939331530228 E444 -M471 -0.105116054790756 V445 -L476 -0.105755217409937 I425 -G466 -0.106451599771896 T470 -L483 -0.107354841271072 K465 -A474 -0.107772576624952 F441 -T468 -0.108911326944043 W448 -E480 -0.109627730968993 I425 -H460 -0.110063433192 L439 -E480 -0.110291003518436 I425 -V457 -0.110940462178834 R423 -C461 -0.111275360877718 G466 -V472 -0.112043608107262 L439 -E444 -0.113113516464249 I425 -G464 -0.113213594065694 G469 -L476 -0.115326532909419 E480 -A485 -0.115430823319273 R424 -H460 -0.115557823305589 R424 -D447 -0.117489637967843 I425 -G469 -0.118745876225958 C473 -V482 -0.119753653438591 V445 -T468 -0.122032135958612 F441 -L476 -0.122056896621862 K462 -R467 -0.123073893689604 C461 -G466 -0.12515279633332 D447 -G469 -0.126695519647942 A458 -K465 -0.128515698876899 R423 -L440 -0.130304071833052 R423 -A458 -0.130418876144411 I427 -V472 -0.131620747460721 I427 -T470 -0.133797531146653 I427 -C461 -0.13409578282501 K462 -M471 -0.134405556786893 G463 -G469 -0.134656453653484 V422 -T468 -0.135158527213459 R467 -C473 -0.136302854167226 M449 -C475 -0.137106630089773 K465 -T470 -0.13726648445771 E444 -I477 -0.13752874391544 W448 -I459 -0.139828409802804 L440 -V472 -0.141716238639814 M438 -D447 -0.14270160247894 E437 -V472 -0.142828391119139 A474 -E480 -0.145034732407933 V422 -M438 -0.145868776953968 K462 -T468 -0.148036346217559 V422 -W448 -0.150664941082426 R424 -F441 -0.151056197429256 V445 -C475 -0.151242093372536 I425 -A474 -0.152102324576597 I427 -E437 -0.152546878829036 E437 -R467 -0.15294220944125 R424 -V445 -0.154334863442035 L440 -I477 -0.155412994730278 A474 -N484 -0.155763830811265 V422 -K443 -0.156997141359541 R424 -N446 -0.157171193266939 E437 -V445 -0.158115281522253 R424 -E444 -0.158588182287529 L440 -A450 -0.160347621600055 R423 -V457 -0.162273090559668 M471 -E480 -0.162731377677853 D428 -H460 -0.16545894569354 D428 -L439 -0.168261151497218 N446 -C473 -0.169506909772583 W448 -I481 -0.16974451044204 L476 -A485 -0.172601380716037 K465 -M471 -0.175621560850501 K443 -C475 -0.17681207158835 L440 -A478 -0.177610627913979 S442 -A450 -0.178585088583359 V457 -C475 -0.178902884492344 R424 -I459 -0.179588364530638 N446 -L476 -0.18067693395535 A478 -A485 -0.181952900164408 W448 -A478 -0.182048033251147 A478 -N484 -0.182123227976863 M449 -S479 -0.184548808084074 T468 -A474 -0.184720063762474 M426 -K462 -0.185672750997178 G469 -C475 -0.18741551662257 R424 -V472 -0.18995513250893 L439 -D447 -0.190037550011651 S442 -D447 -0.190306202466906 S442 -M449 -0.191316847699928 D428 -C461 -0.193874276433842 E444 -A478 -0.195691052892907 M471 -N484 -0.196182080943075 G464 -T470 -0.19729889911419 T470 -I477 -0.198358974112756 N446 -M471 -0.205187156973648 D428 -M438 -0.205847187899991 I459 -T470 -0.206691657763896 G463 -T468 -0.207253659979494 H460 -G469 -0.207416707874186 M438 -C473 -0.210168871339869 R423 -H460 -0.211873448314181 M426 -G466 -0.212645161312024 N446 -C461 -0.214547471418241 S442 -I459 -0.218494866209042 A458 -V472 -0.219520549120586 M438 -A474 -0.220362737360802 E437 -K443 -0.221352587597097 G463 -M471 -0.223051364704641 L439 -W448 -0.223125457154824 T470 -A485 -0.223428198698351 K443 -R467 -0.224190934516568 R424 -M438 -0.224376470152607 F441 -M471 -0.228512131665837 I459 -G464 -0.230200038996516 C461 -M471 -0.231163032091041 C461 -G469 -0.231186975423069 I425 -T468 -0.231195664192882 I427 -M471 -0.234512448010767 K465 -C473 -0.235540770968768 V445 -H460 -0.236038121327435 D447 -V472 -0.238373729259651 I427 -T468 -0.238403869014761 M438 -V445 -0.243272007063607 V422 -I459 -0.245082595575273 R423 -V472 -0.246374723783809 L439 -A478 -0.247520604466127 A450 -A458 -0.249423877003157 H460 -V472 -0.250866309704826 F441 -W448 -0.25361948512499 H460 -G466 -0.256593666098278 W448 -C473 -0.258867121387854 A474 -L483 -0.270144178438666 I425 -C461 -0.274059360610401 L440 -M471 -0.27712133401781 M438 -M471 -0.280005655318944 I425 -F441 -0.286774139282571 L440 -V445 -0.291272023747808 L439 -T470 -0.291502033766533 V422 -V457 -0.296228189340662 D447 -L476 -0.29635586321761 F441 -M449 -0.29782092821494 L439 -V472 -0.299223565989948 T468 -C473 -0.301561718372435 D447 -H460 -0.306836942357284 L440 -D447 -0.307014212997253 T470 -C475 -0.308871288322719 T470 -L476 -0.309137411775115 K443 -C473 -0.311072362534263 L439 -V445 -0.314110768174798 V472 -A478 -0.314533339235743 V472 -S479 -0.316409839888135 S442 -V457 -0.317866746961704 M426 -M438 -0.318965410039882 R424 -M449 -0.323175044628537 A474 -I481 -0.33812753612239 C475 -L483 -0.344584934976476 M471 -L476 -0.344623486397579 E444 -C475 -0.346519945116901 C475 -I481 -0.35184197550233 I425 -M471 -0.357375865921139 K443 -I477 -0.358095998540357 V422 -A458 -0.36306317288135 R424 -C461 -0.373466264459177 C473 -A478 -0.380104186786247 A474 -S479 -0.387772617081552 M471 -I477 -0.393206744302216 C473 -E480 -0.405965080982783 G469 -A474 -0.410010332886812 I425 -R467 -0.413406322696614 S442 -A474 -0.439714912049091 V472 -I477 -0.452380931324496 W448 -C475 -0.455733778531259 K443 -W448 -0.495175725418637 L439 -C473 -0.534010978054832 C461 -T470 -0.539219968089779 C473 -S479 -0.555058052117244 H460 -T468 -0.641642418111856 D447 -V457 -0.664990883958585