[Fri Aug 26 17:42:30 2016] >Input file: TMD5EM22M3D.pdb >TM segments: 607-633_ 635-650 MAIDEN score = -0.9094 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A610 -I644 1.63712376307479 V611 -V645 1.35088085672136 F612 -S646 1.04478584791133 T616 -C623 0.999684785056143 F612 -L647 0.869958791352568 L630 -E636 0.758280537197361 V611 -I644 0.744191725246342 D614 -E648 0.714439070866606 F612 -V645 0.682918493678526 V613 -L647 0.661750988753356 V611 -L647 0.620849210848901 F615 -E648 0.578951437830493 V613 -A649 0.517288791620342 S632 -M637 0.428923555382637 R631 -M637 0.415430031449338 D633 -L638 0.395374592511063 I628 -D633 0.386900037618007 F612 -I644 0.377692819743059 D614 -R631 0.353656049592015 Q624 -P629 0.342028636592296 C623 -R631 0.341888004497751 G608 -E642 0.324028248638324 F639 -I644 0.311257300265131 V611 -D641 0.310174642634169 K627 -S646 0.308357174341503 V611 -S646 0.297726307312316 S618 -A649 0.288792560294053 A625 -L630 0.288084774584894 V613 -S646 0.28114586198831 C620 -N626 0.279528685438634 C620 -E648 0.267944527395843 F612 -E636 0.259723987432194 F615 -L647 0.25853078350328 D614 -D641 0.246721351708762 F615 -Q624 0.238042510018974 F612 -E640 0.236609252030361 G608 -I644 0.196893088553361 A610 -G643 0.19608546962142 N626 -D633 0.193705859249053 R631 -E640 0.192872302372439 N609 -D641 0.187831470982931 M637 -L647 0.187509369519309 D614 -L647 0.179296905102371 V611 -E642 0.162730120374312 N609 -I644 0.160104444577119 A610 -E640 0.157458821609217 N626 -M637 0.156653175415911 F615 -A649 0.153664874685518 R631 -E642 0.152145154305511 I622 -I628 0.145018651259556 P629 -E636 0.141897955505815 V613 -E640 0.134618760336872 C623 -E648 0.133098810743562 F615 -R631 0.133093574501183 I622 -K627 0.132576179439892 R631 -S646 0.122091239839135 E640 -S646 0.111945311047067 S632 -D641 0.105063045411972 A610 -V645 0.103663995524506 F612 -D641 0.10313046073344 S618 -K627 0.101229150195631 K627 -D650 0.101096641646991 A610 -E642 0.0993465128595372 A607 -S646 0.0942877147729275 N609 -V645 0.0933943046249077 V613 -G643 0.0925438283550959 E636 -D641 0.0908961228112251 V611 -E640 0.0885844151502564 P629 -I635 0.0841915606171008 C620 -A649 0.0833721073186641 F612 -L638 0.0816851888695527 T616 -E648 0.0807356061950606 S632 -E648 0.0804297002738075 C623 -A649 0.0792346831290178 F615 -K627 0.0784008776897105 A617 -I622 0.077102329771058 E640 -E648 0.0767805019157839 R631 -L647 0.0749415061063711 F612 -F639 0.0731895284824917 T616 -A625 0.0720183489242903 L630 -E640 0.0713804066905704 D614 -E640 0.0708986211471947 C620 -A625 0.0682423338308256 T616 -L621 0.0667592025599699 F615 -N626 0.0662135574250389 F639 -L647 0.0646857973175461 T616 -A649 0.0643785001463886 M637 -E648 0.0638849302443356 T616 -R631 0.0600838106706754 S618 -A625 0.0591572431104419 F612 -D650 0.0587200583348455 A617 -N626 0.0583621458608086 N609 -M637 0.0556714685300062 E636 -G643 0.0539423330123956 V613 -R631 0.0532058003466416 D614 -S632 0.0528298708953663 A617 -A625 0.0464693986433032 C623 -S632 0.0460446921364519 K627 -E648 0.0450945536214862 N609 -S646 0.0436525857865071 G608 -E640 0.0416262845209894 A617 -L647 0.0410398286826024 E640 -V645 0.0401183108731589 D614 -M637 0.0390526156779556 L638 -G643 0.0355226915044167 F612 -E642 0.0348899571994232 T616 -N626 0.0330226626404437 I622 -P629 0.0322423703475943 A610 -F639 0.031333547728595 I628 -I635 0.0288885502484231 L638 -S646 0.0274029177792301 D614 -Q624 0.0255100155747328 W619 -K627 0.0244384860178437 L621 -L630 0.0203381739256949 D633 -S646 0.0177598297618204 F612 -R631 0.0174342513439192 K627 -E640 0.016573632017296 V611 -L638 0.00666845734124788 V613 -M637 0.004808387539466 A610 -L638 0.00248420489330403 Q624 -A649 0.00144976224064619 D641 -L647 -0.000402600758500959 A607 -D641 -0.00404899437580042 E640 -L647 -0.00418848153338303 R631 -F639 -0.00701958307197215 C623 -P629 -0.0102946714367718 A607 -V645 -0.0112252863009221 F615 -L621 -0.0147809240976011 G608 -S646 -0.0161826999505641 T616 -Q624 -0.0170325919526836 E636 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-0.092300132173964 L621 -I628 -0.0934013107593865 M637 -G643 -0.094004688372253 V611 -M637 -0.0941825896276107 W619 -A649 -0.0952088935412183 N626 -S632 -0.0957028709187728 D633 -E640 -0.0960374922605455 A625 -R631 -0.0971391291428159 K627 -D633 -0.106994070274185 D641 -S646 -0.108120773193794 N626 -I635 -0.109150914741273 W619 -A625 -0.111119872619798 P629 -M637 -0.111447512084301 C623 -D650 -0.112381818697483 K627 -A649 -0.116616869655354 N609 -F639 -0.118204640543762 A617 -I628 -0.11864233021965 I622 -L630 -0.12001464164006 I635 -G643 -0.120198175053543 Q624 -R631 -0.121490444324634 E636 -E642 -0.124717253576482 D614 -L630 -0.126427398085972 K627 -I635 -0.126607528418653 M637 -V645 -0.127800048824669 I628 -E648 -0.127844204239141 L630 -L638 -0.130824574625713 E642 -L647 -0.131358770577993 A617 -Q624 -0.131888684120784 L638 -V645 -0.131931997190046 F639 -V645 -0.135690130560528 D614 -F639 -0.136996838643657 S618 -Q624 -0.137083172254761 A625 -S632 -0.139470184288118 V613 -C623 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-0.525023234234414 C623 -I628 -0.570665452353573 A617 -D650 -0.585385454549377 D614 -A649 -0.588013595150163 F615 -D650 -0.668562739016906 F615 -C623 -0.793541925407802