[Mon Aug 29 17:56:56 2016] >Input file: TMD6WKI5M1G.pdb >TM segments: 646-660 MAIDEN score = -3.0902 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A655 -P660 0.384687764516745 S650 -N657 0.263235686591509 K647 -A655 0.252854057130912 H651 -L658 0.248328559146635 E646 -E654 0.144571680755079 S650 -L658 0.105810950166239 A648 -A655 0.0809840395761601 S650 -P660 0.0388073857730742 S650 -N659 0.0329287577958643 E646 -H651 0.0114160178127893 K647 -F652 -0.0215856611132139 H651 -N659 -0.02689587675007 A648 -N657 -0.0483101001634303 F652 -P660 -0.0512574346942001 E646 -A655 -0.055763737057831 K647 -L653 -0.0612233679230316 K647 -E654 -0.0634906781324185 F652 -N659 -0.063849625591039 E649 -N657 -0.0672145476738094 L653 -N659 -0.0735215260972986 F652 -N657 -0.0758502693271401 K647 -I656 -0.0846610630290465 H651 -N657 -0.0852584792927278 A648 -I656 -0.0919382684065874 E649 -E654 -0.119857762410864 A648 -L653 -0.13071078037871 E654 -P660 -0.148788897072048 F652 -L658 -0.151013438475067 A648 -E654 -0.151272725443653 E649 -A655 -0.154568629719059 L653 -P660 -0.157199130974951 E654 -N659 -0.157339613801251 E649 -L658 -0.158394397233932 E649 -I656 -0.19391334234536 E646 -L653 -0.209455323548806 L653 -L658 -0.217271348818375 S650 -A655 -0.264103591401193 H651 -P660 -0.265960967191428 H651 -I656 -0.277502799322454 S650 -I656 -0.288034899513027 E649 -P660 -0.320010745748072 E646 -F652 -0.417558484602622