[Fri Aug 26 18:10:05 2016] >Input file: TMD7IIZ7M1D.pdb >TM segments: 155-186 MAIDEN score = -4.7218 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C175 -L180 0.748945953165188 F164 -C169 0.659478892324292 F156 -G161 0.624682256519707 D159 -F164 0.478876915706044 C175 -S181 0.278016759813233 S181 -K186 0.241563980691596 L157 -V162 0.205726175757335 F156 -V162 0.204646754558292 D159 -T166 0.194278385120759 G161 -I167 0.177136024381332 H158 -T166 0.173883987429913 L177 -K186 0.169414988693701 G161 -A171 0.165223824256226 A171 -F179 0.160636210402864 G178 -K186 0.157516034230972 C169 -L177 0.157168515876656 H158 -F168 0.156676243574835 G178 -S183 0.145494684326481 G178 -V185 0.143416715953261 S174 -K186 0.137196520217127 G173 -S181 0.130345090116578 A171 -S183 0.120337109885282 L172 -S181 0.115646274455299 G173 -A182 0.1122950853023 A165 -L172 0.110920020870476 V162 -A171 0.100766409652114 L155 -V162 0.09954328400652 G160 -F168 0.099010427703202 H158 -F164 0.0985013862747956 L180 -V185 0.0957848768244185 A171 -A182 0.0935759822949347 L157 -I167 0.0917977250414453 A171 -L180 0.0778985195048882 S163 -A171 0.0748315633861727 S174 -A182 0.073639521880061 A165 -S174 0.0715782860112304 V162 -Y170 0.0701985253848951 C175 -A182 0.0625669113756846 A171 -S181 0.0620585040647086 G173 -L180 0.0588511915317067 C175 -S183 0.0536972819778088 M176 -L184 0.0457864003800865 I167 -L177 0.0427366381070087 G161 -C169 0.0417834369006398 S174 -V185 0.036198318390203 I167 -C175 0.0355003654634656 S174 -L184 0.0330982322137228 L155 -F164 0.0237642365516448 L172 -L177 0.0220816064255702 Y170 -F179 0.0170147723198415 F168 -L177 0.0158901400945757 L177 -V185 0.0131823202210573 C175 -L184 0.0129758419543239 F164 -G173 0.0129521138255053 L155 -A165 0.0119766965933845 Y170 -C175 0.0105958004477653 G161 -Y170 0.0101812403868857 I167 -G173 0.00930757637647162 T166 -S174 0.00898967680956542 Y170 -S181 0.00586287106440864 I167 -L172 0.00321496852353853 F156 -I167 0.00124196332402082 L157 -T166 -0.000921085706909297 S163 -L172 -0.000933957627896623 F164 -S174 -0.00530365000969013 A171 -G178 -0.00636031913455426 A165 -G173 -0.00645540878039297 M176 -A182 -0.0160824628538672 H158 -I167 -0.0201276268458528 F179 -K186 -0.0218775175685977 L157 -A165 -0.0226244029046887 T166 -C175 -0.0239839124609577 F168 -M176 -0.0249255712565848 G160 -C169 -0.028513537078986 F168 -S174 -0.0424033697079258 S163 -G173 -0.046087184597141 S174 -S183 -0.0468478738037401 C169 -M176 -0.0483775303179161 H158 -A165 -0.0485934496915235 F179 -L184 -0.0531771966021291 L177 -S183 -0.053828371156623 F156 -S163 -0.0540041244520281 L155 -S163 -0.0541048388822514 F156 -A165 -0.0544354080962037 Y170 -G178 -0.0589140256639564 A171 -L177 -0.0589788534001769 F164 -L172 -0.0616051379346221 D159 -I167 -0.0621543008218128 S163 -Y170 -0.0649080447495773 D159 -F168 -0.0718299402946192 L177 -A182 -0.0769819608381379 L180 -K186 -0.0772424948883534 G173 -F179 -0.108883784228753 C169 -C175 -0.111851133094933 C175 -V185 -0.114472499869044 G161 -F168 -0.116728591972469 Y170 -L177 -0.119607889129917 Y170 -M176 -0.119726449803098 I167 -M176 -0.12019742300636 L177 -L184 -0.125907898517728 G160 -T166 -0.127113026830006 F168 -C175 -0.140048724981464 L157 -F164 -0.143303476688696 L155 -G160 -0.145450608033738 F179 -V185 -0.147138133461765 T166 -M176 -0.15047190430089 L172 -A182 -0.150640257477495 F164 -A171 -0.152978226166845 S163 -F168 -0.159954984367647 C169 -S174 -0.160050451139974 F164 -Y170 -0.160056585148146 F156 -F164 -0.163040282318649 I167 -S174 -0.172564268300808 A165 -A171 -0.172816101895847 G160 -A165 -0.185645444119807 G160 -I167 -0.191585233137534 M176 -S181 -0.19240196199563 L157 -S163 -0.199467435554921 L172 -L180 -0.204616390292846 C169 -G178 -0.206819092006928 D159 -A165 -0.216687622216763 S174 -F179 -0.22212253733037 A171 -M176 -0.228261027978331 L172 -G178 -0.231589048784755 T166 -G173 -0.234267084042143 L172 -F179 -0.250039624498894 F168 -G173 -0.257683465196175 G178 -L184 -0.27240090696499 A165 -Y170 -0.295483891797437 T166 -L172 -0.300208546182113 T166 -A171 -0.300839368352067 L155 -G161 -0.333822177722261 S174 -L180 -0.340268896261449 G161 -T166 -0.341919607519705 H158 -S163 -0.364424892170801 V162 -F168 -0.365656904155496 V162 -C169 -0.382224768550779 G173 -G178 -0.425432744055602 V162 -I167 -0.467487606714419 S174 -S181 -0.528813582883296 S163 -C169 -0.554174036185914