[Mon Aug 29 18:12:43 2016]
>Input file: TMD9VNK3M1G.pdb
>TM segments:  298-333

MAIDEN score = -9.6921

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
F312 -V324 		0.832015010189446
F312 -V323 		0.649695514513807
A318 -V323 		0.539847215825254
A314 -V323 		0.473340411658025
D325 -A330 		0.448111672300745
F312 -R326 		0.432405536791683
P315 -I322 		0.426174591440926
A328 -V333 		0.384881556676227
A301 -A309 		0.314965192662459
F312 -H327 		0.308351713823727
C319 -H327 		0.308063166916258
H327 -T332 		0.299542613174103
L313 -V323 		0.284416117701823
G298 -A309 		0.273859548055182
A309 -R326 		0.263523473904238
A320 -D325 		0.258126428716378
P315 -H327 		0.250239223429183
G298 -A304 		0.24513958945075
G298 -G310 		0.22331094980485
V311 -I322 		0.222533706462843
L308 -P329 		0.220554017506291
V300 -G310 		0.21902633001943
G310 -T332 		0.208846481247839
A301 -F312 		0.190406384466113
P299 -G310 		0.189255940780066
D325 -T332 		0.182149394693023
F312 -D325 		0.178238910198996
A314 -R326 		0.166634762343949
S316 -V324 		0.16623588841485
A304 -G310 		0.145479170287488
A318 -R326 		0.143546472275532
A304 -T332 		0.140849363186587
A307 -T332 		0.13817939371193
V311 -V333 		0.135105064298174
A309 -A320 		0.132359057602545
G310 -G331 		0.130240435049863
P299 -A304 		0.123718823868711
A309 -S316 		0.113479670301741
A301 -H327 		0.110978759470076
A314 -F321 		0.108102068547591
G310 -A318 		0.107558183933334
A306 -G331 		0.106772108520054
G298 -A307 		0.106126908118146
A304 -V311 		0.10601932429297
A309 -L317 		0.105109544938858
C319 -A328 		0.103724119615833
M302 -G310 		0.0977948079203212
A320 -P329 		0.0952350851597958
V311 -P329 		0.0952219198070159
L313 -A330 		0.0943632419355784
A307 -V323 		0.0939080252704536
A318 -D325 		0.0917021071287794
A301 -L313 		0.0914576662336284
A309 -V333 		0.0907257426738926
G310 -A320 		0.0896904151941009
L317 -V324 		0.0890635701322851
A304 -G331 		0.0890430503827799
D325 -V333 		0.0851805959955829
V311 -L317 		0.0851396584124808
G310 -H327 		0.0826933338915614
F312 -G331 		0.0813321259037938
A304 -F312 		0.0767641053698718
A314 -A330 		0.0749812709923896
L308 -V324 		0.0749763498078241
G310 -V324 		0.0724910165301331
L308 -V333 		0.0723914596270872
V311 -A318 		0.0690840593082718
G310 -A330 		0.0665187966336314
I322 -P329 		0.0656856624216513
T303 -G310 		0.0650820612944494
S316 -H327 		0.0632088762695544
A301 -A330 		0.0609233322175258
L305 -A330 		0.0574928738342182
A309 -A328 		0.052601009263626
A320 -A328 		0.050796944439921
L308 -T332 		0.048772641306206
A307 -A330 		0.0486365509672308
L313 -D325 		0.0474528516571784
L308 -P315 		0.0409326683123794
L313 -T332 		0.0346842197641208
F312 -P329 		0.0340724659178964
V311 -A328 		0.0336909246295418
M302 -T332 		0.0327524569160649
L308 -A328 		0.0325085939542957
A307 -G331 		0.032380743043718
F321 -A330 		0.03102935181664
G310 -R326 		0.030003642719417
A307 -R326 		0.0268856051660489
A314 -V324 		0.0225415229594588
A306 -P315 		0.021055898212218
P315 -A320 		0.0203290429527061
S316 -D325 		0.0190794729586681
G310 -L317 		0.015743300215318
A318 -V324 		0.0127844894263984
I322 -A330 		0.0126969651792304
A306 -A314 		0.0117998998658535
A309 -H327 		0.00964703307258663
A309 -V324 		0.00908953907236587
P315 -F321 		0.00812226094800916
A309 -P329 		0.00534527655230277
P315 -V323 		0.0050264002811109
V323 -G331 		0.00501341529683641
G310 -D325 		0.00338433438627697
V311 -G331 		0.00336205988865323
A301 -G331 		0.000815787145568514
F312 -V333 		0.000454863012567364
D325 -G331 		0.000181791436643874
T303 -L313 		-0.000912569409941888
V311 -A320 		-0.00190004920989995
A301 -L308 		-0.00241323855982323
S316 -V323 		-0.0036515571435265
A314 -H327 		-0.0042590678938117
M302 -F312 		-0.00474706685957205
A320 -A330 		-0.00480761615733005
V300 -V311 		-0.00547053766225503
V300 -A307 		-0.00835557929887898
V300 -A309 		-0.00906103403542868
G298 -L313 		-0.0113840283144331
P299 -T332 		-0.0117143445813097
P315 -A328 		-0.0122749086282719
V323 -V333 		-0.0125376643235349
A307 -F312 		-0.0130024139531595
A301 -T332 		-0.0140115240935286
L308 -R326 		-0.0166276634193165
V324 -G331 		-0.0174894436917272
L305 -V333 		-0.0189604662160905
H327 -V333 		-0.0235893077290494
V300 -F312 		-0.0261357100415328
A301 -V311 		-0.0265688170039722
L308 -A330 		-0.0283852942541736
A306 -A330 		-0.0305695745154555
V311 -T332 		-0.0312414860722923
P299 -A309 		-0.0332891628527014
A306 -H327 		-0.0337266206668421
F312 -A330 		-0.0346257349605015
M302 -A307 		-0.0349461324226885
V300 -T332 		-0.0351944815002785
V311 -F321 		-0.036172373111226
P299 -A307 		-0.03671273692476
L313 -A318 		-0.0387182098544835
P299 -L308 		-0.0416737106212448
A309 -P315 		-0.0436895251949929
R326 -T332 		-0.0451155671188819
P315 -A330 		-0.0481133667243276
A301 -V333 		-0.0526831051892822
L308 -S316 		-0.0527371660795461
S316 -R326 		-0.053047893323131
T303 -V311 		-0.0563174863725568
V323 -T332 		-0.0597807211293881
L313 -G331 		-0.0663029186279998
L313 -A328 		-0.0666341683741853
A307 -P315 		-0.0669647998599319
A301 -A314 		-0.0681116583087911
A306 -F312 		-0.0736747763714938
A309 -D325 		-0.0752307110703185
R326 -G331 		-0.0759646587027012
L317 -R326 		-0.0761776688040012
F312 -A318 		-0.0787060333037815
F321 -P329 		-0.0806021970561552
S316 -F321 		-0.0821218174337748
A314 -D325 		-0.08238203937785
A306 -T332 		-0.0846528639694524
L305 -F312 		-0.0858879328012256
L308 -L313 		-0.0882667124967282
F321 -A328 		-0.0914997945586045
V311 -R326 		-0.0917129493648363
G298 -T303 		-0.0933847604292559
M302 -A309 		-0.095794079881145
M302 -L313 		-0.0965760703652599
A309 -T332 		-0.100284943838828
V323 -A330 		-0.100769792411315
L305 -A314 		-0.103637608911933
G298 -L308 		-0.104360818242024
G310 -I322 		-0.10526999341276
L313 -R326 		-0.109347521710131
V300 -L305 		-0.111018920055216
G310 -C319 		-0.111152835428173
V311 -H327 		-0.111947066684031
A301 -G310 		-0.113520301870123
G298 -A306 		-0.113612574395344
G310 -V323 		-0.115580883863483
A307 -A314 		-0.117192008657749
A320 -H327 		-0.118315464481667
P315 -V324 		-0.121036351733358
F312 -I322 		-0.122493782847015
V311 -D325 		-0.123679646277603
C319 -V324 		-0.127810633219152
F312 -A328 		-0.128617785824686
V311 -C319 		-0.130920277999442
A309 -I322 		-0.133433407437115
G298 -L305 		-0.135115369246408
M302 -V311 		-0.13650544336129
P299 -A306 		-0.136624786074687
F312 -F321 		-0.137990827962985
F312 -L317 		-0.144935454743979
A309 -V323 		-0.1478419163906
G310 -S316 		-0.148539154798283
L313 -I322 		-0.14918501604622
F321 -R326 		-0.149890462071438
L313 -F321 		-0.150002758508406
A307 -H327 		-0.15116582654085
A318 -H327 		-0.159763323857765
L308 -V323 		-0.160459128605553
A309 -G331 		-0.163221098755997
L305 -H327 		-0.169728829580655
R326 -V333 		-0.172008334907955
A314 -A320 		-0.175352023671706
F321 -H327 		-0.17721311828303
L305 -G331 		-0.177338790408907
L308 -D325 		-0.179476752088531
L317 -V323 		-0.180316293097291
V311 -V323 		-0.181372294789192
A320 -R326 		-0.182512216809668
L308 -A314 		-0.183422073103943
A304 -A309 		-0.184799730378839
T303 -A309 		-0.185420399202307
V324 -P329 		-0.185570302928356
V311 -V324 		-0.186466639387495
A309 -A330 		-0.204177041415558
M302 -G331 		-0.205703905719226
V323 -P329 		-0.21515226208369
V311 -A330 		-0.219256158934191
L308 -H327 		-0.225596990005893
V300 -L313 		-0.226378205988472
V300 -L308 		-0.229906104837603
L305 -L313 		-0.230294756343241
P315 -D325 		-0.233312504074605
F312 -T332 		-0.235307273591179
I322 -A328 		-0.243095596702037
L305 -T332 		-0.248711545961919
G310 -P315 		-0.249765480032377
V324 -T332 		-0.25277465966535
A301 -A306 		-0.254615484230736
A306 -V311 		-0.26727558432113
L308 -G331 		-0.268468961770992
L317 -I322 		-0.270382784052014
L313 -H327 		-0.274769058301044
S316 -I322 		-0.274926016737408
I322 -H327 		-0.27770384067229
F312 -C319 		-0.278086095746364
L305 -V311 		-0.285592553357639
V323 -A328 		-0.288023293017197
T303 -L308 		-0.292626807955797
A307 -L313 		-0.29300308279066
A306 -L313 		-0.294537942079686
L313 -A320 		-0.302806294165734
A314 -C319 		-0.314619115548525
A314 -I322 		-0.331418225003132
C319 -D325 		-0.333230944549133
V324 -V333 		-0.353028095739914
V311 -S316 		-0.356294347770511
A301 -A307 		-0.368505538443817
P315 -R326 		-0.372933388817547
A309 -A314 		-0.377873254842881
L313 -V324 		-0.401809752849761
L305 -G310 		-0.421421601212715
V300 -A306 		-0.422491954514706
V324 -A330 		-0.44602452784335
M302 -L308 		-0.456030832864328
F312 -A320 		-0.462971621893024
L313 -C319 		-0.504942848037753
P299 -L305 		-0.531037624203669
C319 -R326 		-0.534737959077886