[Mon Aug 29 18:14:24 2016] >Input file: TMD9X512M1G.pdb >TM segments: 146-158_ 192-208_ 245-262_ 276-294 MAIDEN score = 19.0283 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L248 -A253 10 L248 -G254 10 P245 -L251 1.79801806957295 P250 -L255 1.42597226441555 E147 -A152 0.95185050388572 V195 -F291 0.722088802467466 L257 -L278 0.718859733567309 R279 -N287 0.665018071012211 L249 -A286 0.652162202516267 L248 -A286 0.639548695481345 P245 -L252 0.633193912035475 L248 -L255 0.608494461822173 S198 -F291 0.592227781023154 W158 -G276 0.566968920582959 A199 -F291 0.546366412730068 T247 -A253 0.544356671383738 T247 -L252 0.544171463165899 R151 -L280 0.538701135890932 L248 -S282 0.527483155868689 F261 -L278 0.507507265156378 A246 -L252 0.500262244810343 A246 -L251 0.442357388645455 A154 -R279 0.438936463587908 A253 -S282 0.434279103674012 R151 -L277 0.431738709372191 L257 -S282 0.41741961466949 L257 -R281 0.414979299115659 L257 -R279 0.408219198527941 A150 -V283 0.391238201941848 L248 -S285 0.380135555587751 L249 -L255 0.370075050733655 A194 -A289 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