[Fri Aug 26 18:27:07 2016] >Input file: TMD9XA88M1D.pdb >TM segments: 158-179 MAIDEN score = 4.7025 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I163 -T170 2.37732634712659 A162 -V169 1.73387684051647 I163 -P168 1.34783183020222 I163 -V169 0.78628025382586 F166 -V172 0.709669663489961 A174 -Y179 0.669439237625347 F166 -D175 0.520872269628412 G164 -T170 0.419423419202406 A162 -A174 0.298159113801619 A161 -T170 0.272838658594893 G167 -D175 0.269213538869571 I163 -T171 0.26760797028477 G164 -A174 0.239327895261614 V173 -S178 0.233502204286158 L165 -T171 0.204162014117816 A161 -G167 0.200717764900856 G159 -T170 0.174759970555872 V169 -A174 0.16317176263037 G167 -A174 0.152031590420461 V172 -S178 0.141542314183078 F166 -A176 0.13856674564177 L165 -V172 0.131495377795542 L165 -T170 0.118873930766934 A161 -A174 0.109888248766218 G159 -P168 0.100860625990743 G159 -G164 0.0952122875639718 G160 -P168 0.0922266871083326 A162 -T171 0.0913270800294548 A161 -V172 0.0897373037671991 L158 -I163 0.0894211408113035 V172 -Y179 0.0855024449172694 G160 -V173 0.0772128333903241 G164 -T171 0.0759222345714128 I163 -V177 0.0749850288493008 L165 -A174 0.0711130589335935 P168 -S178 0.0532700305881608 G164 -V173 0.0471310487549772 G160 -G167 0.0457418225104242 F166 -T171 0.0428325515616883 G167 -V172 0.0397826638037562 A161 -F166 0.0378140485983796 V169 -S178 0.0373810694342671 P168 -A176 0.0367340601770421 G159 -G167 0.0298776734390889 G167 -A176 0.0249071357718886 A162 -D175 0.020792945011407 A161 -V169 0.016652019871076 V169 -V177 0.00182954920467804 G160 -T170 -0.00224796893410617 G160 -V169 -0.00404079789075151 F166 -Y179 -0.00563279844959652 T170 -D175 -0.00963869081843072 A162 -T170 -0.0119651029433681 T170 -Y179 -0.0301560077785687 L165 -D175 -0.0311002142606968 T171 -Y179 -0.0340338099958983 G167 -S178 -0.0346028830113001 L158 -P168 -0.0353552584855734 G167 -V177 -0.0373958114065385 G164 -D175 -0.0476009140119364 G160 -T171 -0.050177169025624 P168 -V177 -0.06466904119582 F166 -S178 -0.0692353777380361 I163 -S178 -0.0804524413293911 I163 -D175 -0.0877841304211886 F166 -A174 -0.0909030352146054 G160 -V172 -0.104896673949521 A161 -T171 -0.107015846451469 V172 -V177 -0.107966218588752 G159 -V169 -0.113575647235828 F166 -V177 -0.116708893953247 A162 -V172 -0.119473696200409 A161 -P168 -0.126599444610575 A161 -D175 -0.127554874555437 A161 -V173 -0.134805473477349 L165 -A176 -0.145879118875022 P168 -A174 -0.146024412447084 I163 -A176 -0.149804781564702 V169 -A176 -0.157374189943878 T170 -V177 -0.165336260656904 I163 -V173 -0.175768822011651 G167 -V173 -0.183738372218259 L158 -V169 -0.198957806650689 G164 -V172 -0.201095260930926 L165 -V173 -0.205787923315123 T170 -A176 -0.209351204210392 A162 -P168 -0.21375193671336 T170 -S178 -0.214601245421118 T171 -V177 -0.218363235737705 V169 -D175 -0.223161524031656 G164 -V169 -0.235118714140489 P168 -V173 -0.23806655098667 T171 -S178 -0.263378077293335 A162 -V173 -0.324012482360619 P168 -D175 -0.329383137986199 T171 -A176 -0.33213461488219 I163 -A174 -0.343021456504717 F166 -V173 -0.34777835922368 V173 -Y179 -0.380644571106891 I163 -V172 -0.482324624426093 A162 -G167 -0.485930409842204