[Fri Aug 26 16:31:43 2016] >Input file: TME0VS99M4D.pdb >TM segments: 138-174 MAIDEN score = -5.2215 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L138 -N160 0.991039104148324 Q151 -L173 0.933450054373498 K150 -I174 0.723813951468467 L152 -L173 0.70795509795428 L138 -L162 0.654675111465986 E139 -L162 0.649591310151809 E153 -L173 0.604982885704306 G143 -V148 0.460912427325715 G143 -S169 0.446405557004341 V141 -L157 0.410915103828982 R154 -L173 0.410734346696445 V148 -L173 0.403650403975763 V141 -L162 0.358249897484433 R154 -N172 0.345116341342362 V148 -D156 0.334654060666361 P142 -V148 0.291405242066221 T140 -L162 0.288797569066755 E144 -Q168 0.273440815563336 E144 -N166 0.262779361510524 T140 -K161 0.252419199946304 E144 -L149 0.248349960816818 P142 -L162 0.241349156144222 V148 -I174 0.224185943075094 D156 -K161 0.222082139517975 V141 -I165 0.220368100829786 Q151 -N172 0.220219725149285 L138 -G143 0.216055260066401 P142 -Q168 0.214182490723149 L155 -N160 0.203070918280309 L149 -N172 0.200809249350827 L152 -N172 0.196123651662217 K150 -D156 0.194310782155603 T140 -I165 0.188027698749792 T140 -F170 0.181897169744393 P142 -R154 0.163703749300724 Q151 -F170 0.162809402815312 L149 -L173 0.161583468114996 A145 -S169 0.155672017592078 P142 -N166 0.152678907807307 K147 -L152 0.149426621830711 A145 -Q151 0.145809034636817 G143 -F167 0.139145544999727 K147 -D156 0.136578819474849 K150 -S169 0.130940553831807 V148 -S169 0.127626152252271 L157 -S169 0.125184412372361 V141 -S169 0.125166958455314 L155 -L162 0.122535564916905 L138 -K161 0.119210345414825 G143 -N172 0.116139077364681 K147 -N172 0.115303516600995 L157 -L173 0.113698886213725 L152 -L157 0.106617174340326 V141 -L149 0.103364962998503 E153 -N172 0.103338551246753 L157 -D164 0.102352471774339 T140 -A145 0.101669991737922 D156 -L162 0.10133552446285 E139 -N160 0.101034188594884 L149 -S169 0.0962117774174569 V141 -S158 0.0956003158959966 D156 -L173 0.0949617447577735 L146 -L155 0.0941864442740972 P142 -N160 0.0939409489641712 V141 -N172 0.0883268389098657 E153 -F170 0.0870798085845461 L138 -L155 0.086530402313352 V141 -L152 0.0855464647904505 P142 -I165 0.0824810562430465 L155 -V171 0.0738405921648119 L138 -E144 0.0708621491552036 P142 -Y159 0.0703551442371224 L162 -F167 0.0685347925140394 E139 -E144 0.0685241447958651 A145 -L157 0.0619262567939511 L157 -S163 0.0586092734223604 G143 -I165 0.0581191847231652 G143 -L155 0.0576411872566013 P142 -D164 0.0571727851693775 G143 -L157 0.0566249057153403 E139 -S163 0.0561603129226702 E144 -F170 0.0555605717977241 T140 -N172 0.0548008666874624 G143 -N166 0.0542407709623154 A145 -R154 0.0509454813921657 N166 -N172 0.0506162382483282 L155 -S169 0.0502148919061449 T140 -D164 0.0483484797803113 S158 -D164 0.0482547770402836 V141 -R154 0.0478361037888695 T140 -D156 0.0475335028102624 L162 -F170 0.0469282771475248 K150 -V171 0.0455644402134219 K147 -E153 0.0454894786392677 T140 -K147 0.0428544614897372 P142 -S158 0.0398308961464249 P142 -D156 0.0377907429816271 A145 -L155 0.0354446219181037 V148 -N172 0.034344216740104 V141 -F170 0.034007922697767 A145 -L173 0.0315416736134959 N160 -I165 0.0307835920886652 A145 -L152 0.0275566395326696 L162 -S169 0.0270263033245471 T140 -V148 0.0263349323048889 S163 -Q168 0.0250034736973002 S158 -I165 0.0247219326548591 V141 -K147 0.0236640275378475 D156 -S169 0.0236510473014426 L157 -F170 0.0202156572747487 G143 -L152 0.0195466906636246 E139 -Y159 0.0188313364648498 G143 -K150 0.0185099975983332 E153 -V171 0.0173400120979557 T140 -S163 0.0147927186732013 E144 -V171 0.0144660807109886 L155 -F167 0.0143497688269392 I165 -V171 0.0120979983366043 V148 -Q168 0.00716186955937709 G143 -L173 0.00503794402195368 S163 -S169 0.00413282949977434 L146 -F170 0.00253849000371176 G143 -I174 0.000668986041193254 E144 -S169 -0.00269479463201616 L138 -D156 -0.00515502956149838 E144 -I174 -0.00516764298100258 T140 -L146 -0.00744486350540363 L146 -Q151 -0.00763160950570353 E144 -L173 -0.0086012885075748 A145 -V171 -0.0088403023808038 L152 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