[Mon Aug 29 17:04:41 2016] >Input file: TME3PF95M1G.pdb >TM segments: 39-64 MAIDEN score = -0.4030 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M57 -K62 1.16668643225081 P46 -I51 1.08262493304132 A56 -K62 1.07459720192604 F48 -A53 0.523433371424219 A56 -V61 0.358958341106995 M47 -S52 0.350421866762598 M57 -I63 0.266360180563451 P46 -S52 0.254165960966541 S52 -S59 0.207651397950035 V44 -P49 0.206658176545381 V41 -F48 0.203394913336868 I45 -Y54 0.140778788678944 A53 -A60 0.131823012073836 A53 -S59 0.129388617272935 A42 -F48 0.0971865577130746 A56 -I63 0.0873136994755015 A56 -S64 0.0866418977151451 V44 -A53 0.0861525095648683 F48 -T55 0.0721190433489394 V41 -P46 0.0655742621397244 A53 -I58 0.0604284634134151 V41 -P49 0.0570311995888247 I51 -I58 0.0488789811600343 I45 -S52 0.0408334335231992 I45 -G50 0.0326024206373354 F39 -F48 0.0281557388584428 G50 -M57 0.0250980143735529 T55 -I63 0.0216183986561447 A43 -S52 0.0203883662645192 T40 -F48 0.0192180367753111 V44 -G50 0.0101285074683997 S52 -K62 0.00846458431407093 F39 -P46 0.00490664304254462 S59 -S64 0.00427875385354604 T40 -P46 0.00390056506348468 I45 -I51 0.00312272073464825 P49 -M57 0.00278085746871382 T40 -G50 -0.0015909536363643 G50 -A56 -0.00163347109421341 T40 -P49 -0.0104339492389744 A43 -F48 -0.0196254033169079 S52 -V61 -0.0210231601504354 S52 -I58 -0.0243675870302142 P46 -T55 -0.0254016699716715 P49 -I58 -0.0287920451051997 A53 -V61 -0.0291585856837648 I51 -A56 -0.0310159830932193 I51 -M57 -0.0434827406070313 P49 -A56 -0.0473410721054566 Y54 -I63 -0.0533289917128092 A42 -S52 -0.0711391456282762 A43 -A53 -0.0727859899077514 A42 -M47 -0.0757987695169717 F39 -V44 -0.0795320648836988 P49 -Y54 -0.0806305224798933 I58 -S64 -0.0806392077411888 M47 -A53 -0.081044266891749 P49 -T55 -0.084472513730626 Y54 -A60 -0.0860074682884607 P46 -Y54 -0.089775144001594 A42 -G50 -0.0918422103536551 M57 -S64 -0.0931660435949578 A42 -I51 -0.0960149220816474 V41 -G50 -0.0986696281375359 G50 -I58 -0.103162927248251 T55 -K62 -0.104222648261441 T55 -V61 -0.106112276254118 T40 -I45 -0.117903318960129 V41 -I51 -0.125165428539918 M47 -Y54 -0.12552858430616 Y54 -S59 -0.131036008937055 A43 -P49 -0.137014668833903 A53 -K62 -0.139970641862786 Y54 -K62 -0.151134288440934 S52 -M57 -0.16554958566514 M47 -T55 -0.169427520047386 A43 -I51 -0.173907172240201 A42 -P49 -0.175553117520678 F48 -Y54 -0.178333660974057 T55 -A60 -0.203306002073345 F39 -M47 -0.225576559379732 G50 -T55 -0.244208734501791 V41 -M47 -0.253276894546727 A43 -G50 -0.258784793625972 F39 -I45 -0.267643939757125 V44 -I51 -0.271115800918741 I58 -I63 -0.290325905750638 I45 -A53 -0.302262591607441 T40 -M47 -0.320347651161155 V44 -S52 -0.328381898334661 Y54 -V61 -0.36697705661139 P46 -A53 -0.431783605262946