[Fri Aug 26 16:56:55 2016] >Input file: TME3QPC5M2D.pdb >TM segments: 557-579 MAIDEN score = 1.4773 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I560 -N565 1.96123934083613 I560 -T566 0.725928927519215 F570 -N575 0.633660640294722 P571 -L579 0.626114106664556 P571 -I576 0.566566692767402 P571 -P577 0.40207464619319 Q558 -N565 0.348834749105253 I560 -M569 0.346005006983879 Q558 -Q568 0.237536101893221 N565 -G572 0.199112184586516 N565 -R573 0.193946253750253 S564 -P571 0.178063676684444 Q558 -M569 0.170099596751745 S557 -F570 0.151604872891127 Q558 -F570 0.144370028884315 Q559 -R573 0.142110485700463 T566 -P574 0.137000052552946 S562 -Q568 0.136103976419713 Q559 -S564 0.130001235708801 Q568 -N575 0.126106258919171 Q559 -F570 0.1195925381965 S557 -T566 0.116104828503178 T566 -P571 0.116103580828995 N565 -P571 0.097448128866028 Q558 -R573 0.0934618813713084 I560 -G572 0.0880024618827389 A563 -F570 0.0855266287802658 G572 -L579 0.0830157833248003 Q568 -R573 0.0820880604457876 V567 -L579 0.074920459925339 Q558 -V567 0.0730308232180836 M569 -P577 0.0716016458117339 V561 -Q568 0.0669717118807759 S557 -M569 0.0660351629827836 T566 -N575 0.0639704623804378 Q559 -V567 0.0508653195709168 Q568 -L578 0.0500860516102142 T566 -I576 0.0402055879242371 S562 -V567 0.0344228386294318 Q558 -G572 0.0319723707313768 A563 -M569 0.0310341063387201 V567 -L578 0.0263707152370605 T566 -R573 0.0197267084750115 M569 -L579 0.018375318437907 I560 -F570 0.0134883776032164 V561 -V567 -0.000338684570587944 F570 -L579 -0.0024242196339932 F570 -P577 -0.00320208175484549 I560 -R573 -0.00579091342904969 V567 -N575 -0.0193326622998056 Q559 -G572 -0.024393925003388 S557 -V567 -0.0267851917307254 S562 -M569 -0.0311464807554893 S562 -F570 -0.0365307351547601 S564 -G572 -0.0449348860070122 Q568 -L579 -0.0465492350815522 A563 -Q568 -0.0473848496569884 Q558 -A563 -0.0565212105132562 M569 -L578 -0.0570486427307024 V561 -M569 -0.0616318226075558 S564 -F570 -0.0647556607027152 Q558 -S564 -0.0792000588644661 S557 -S564 -0.0797054278811071 N565 -P574 -0.085416457267081 Q568 -P577 -0.0933558962143204 Q559 -P571 -0.0948429369248092 G572 -L578 -0.0987917052870653 N565 -F570 -0.10161922267367 S557 -R573 -0.106314349124192 Q558 -P574 -0.108733936071295 V561 -F570 -0.109711144294106 I560 -P571 -0.113433977256978 Q559 -Q568 -0.121711713865713 R573 -L579 -0.127108995379788 Q559 -M569 -0.134496923472589 Q559 -T566 -0.138658653406882 M569 -N575 -0.156480238373023 R573 -L578 -0.157705883492875 F570 -L578 -0.158782867716635 P571 -L578 -0.159683134123354 V567 -R573 -0.164900218878744 I560 -V567 -0.174025206365098 T566 -G572 -0.183125854259234 V561 -T566 -0.191221745253785 S564 -M569 -0.191936022652477 S557 -N565 -0.202603024517933 M569 -P574 -0.202903670100304 V567 -P574 -0.2129457479187 V567 -I576 -0.215118071189026 Q558 -T566 -0.220261694115679 V567 -G572 -0.237031170201871 G572 -P577 -0.249723625316271 I560 -Q568 -0.265012669298461 Q568 -I576 -0.274223175768749 F570 -I576 -0.316606652069625 M569 -I576 -0.341234551895745 P574 -L579 -0.414827358383854 Q568 -P574 -0.434403532165774 Q559 -N565 -0.446934664058842