[Mon Aug 29 17:08:15 2016] >Input file: TME4ZNC2M2G.pdb >TM segments: 494-528 MAIDEN score = -2.1622 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L511 -I521 0.80650497666909 A513 -I518 0.606879429276775 I512 -G517 0.44692346463856 R502 -V509 0.433875498982115 I512 -I518 0.363411983910841 R501 -D508 0.348180899555285 R501 -I521 0.321541085877387 A505 -S527 0.298479241435434 G514 -A520 0.275349503335448 M499 -D507 0.274541769273312 R501 -L528 0.253299603667584 T519 -L526 0.242145766962167 G515 -A520 0.239221895269926 P495 -Q500 0.217232153961678 R502 -V510 0.200066409889552 R501 -V510 0.188818105571583 G515 -I521 0.18174282573501 P495 -S523 0.171974776925342 V510 -V522 0.171482049717885 R502 -S527 0.165454470224808 R501 -Q524 0.162854671733587 G517 -Q524 0.160550793129774 I503 -V509 0.156990231251539 I512 -I525 0.156248193394868 R502 -D507 0.139570367711095 R501 -V522 0.132354712639796 Y496 -R501 0.129997169925883 L511 -L526 0.126720164907622 L511 -L528 0.113988302066813 V510 -G517 0.110644682422065 L511 -S516 0.108012554485041 M499 -V509 0.106641203763024 V510 -A520 0.105158660354716 R501 -V509 0.101691163164316 G498 -A520 0.0981414803945251 Y496 -A520 0.096140507176063 P495 -A520 0.0960495099421621 D507 -L528 0.094451177331911 L511 -S523 0.0943567529458906 V510 -I525 0.0882298743476104 T519 -S527 0.0869311688913648 G497 -I521 0.0861608495619548 G517 -S523 0.0840205744561011 Q500 -V522 0.0806028287976743 A520 -L528 0.0804901554274489 A505 -L511 0.0789708198541108 Q500 -L528 0.0781648628859122 L511 -I518 0.077444384184294 Q500 -V510 0.0764371626619191 M499 -L511 0.0759981425724452 D507 -S527 0.0756473066723657 S516 -Q524 0.0747417191032111 M499 -I512 0.0709071967146944 E504 -S527 0.0706482169526454 G494 -Q500 0.0699891283945839 V509 -A520 0.0693090924570914 Q500 -A505 0.0672778452103062 D508 -L528 0.0665556499539779 I503 -Q524 0.0649128356281481 Q500 -V509 0.0623961595498615 I503 -I525 0.0619790093464552 A520 -S527 0.0615096055337023 M499 -G517 0.0610995606172606 I512 -Q524 0.0595661891536761 V510 -L528 0.0554496869685703 Q500 -T519 0.0552677487687623 D508 -Q524 0.0551050783226559 A513 -Q524 0.0549015671458841 M499 -Q524 0.0547420974506158 A513 -V522 0.0519104844227827 A513 -S523 0.0515001346947725 Q500 -I525 0.0471786740613531 I503 -S527 0.0470517127809378 R501 -L526 0.0435860719040804 G497 -S523 0.0431076425813481 M499 -I521 0.0423417933877257 V510 -Q524 0.039293560524261 Q500 -G517 0.0362473967514063 V522 -S527 0.0336114759615187 G497 -R502 0.0320417514554805 G497 -A520 0.0317551902066668 G498 -I503 0.0284237821690638 R501 -F506 0.027974268516784 M499 -A505 0.027062627829336 V509 -V522 0.0250998930631909 Q500 -L526 0.0160343226840292 A505 -V510 0.0121462158539005 S516 -S523 0.0080751412744946 Q500 -F506 0.00355640776263932 G494 -S523 0.00335553285000012 T519 -L528 0.00278644531354288 E504 -Q524 0.00145355228344535 R501 -I518 0.00101243332658996 I503 -D508 -0.00105776643030797 Y496 -R502 -0.0021868075345115 G494 -A520 -0.00250134168914862 G514 -V522 -0.0031721511863676 V509 -L528 -0.00523441732532515 G498 -Q524 -0.00871917456747129 I518 -S523 -0.00909051119579996 M499 -A520 -0.0126904684196045 V509 -I525 -0.0159769196978834 A513 -I525 -0.0163633105127144 T519 -Q524 -0.0169842908489032 G497 -Q524 -0.0170161414126495 Q500 -D507 -0.0185124797828946 R501 -I525 -0.0224848111660716 A505 -Q524 -0.0254498179142888 L511 -Q524 -0.0283964715333607 D507 -I525 -0.0327507930769547 Q500 -L511 -0.0334325419413011 L511 -A520 -0.0340599072310448 R502 -I525 -0.0346498917613989 M499 -V510 -0.0388087167681181 D508 -I521 -0.0391868208732917 E504 -L528 -0.0403159136388682 R501 -T519 -0.0445642057580705 R502 -I521 -0.0477952914492819 A505 -I525 -0.0487811845710153 I518 -S527 -0.0493083100290779 D508 -I525 -0.0496151156324289 G497 -T519 -0.0525862447263881 F506 -S527 -0.0559195628991835 P495 -T519 -0.0563523180608918 Q500 -Q524 -0.0645247009174931 D507 -Q524 -0.0660694998311169 Q500 -S527 -0.0671906292059772 V509 -S523 -0.068708937822386 Q500 -S523 -0.0721005883067671 I503 -V510 -0.0727150921275488 R502 -L526 -0.0735806642287413 V509 -L526 -0.0738312530839336 R501 -L511 -0.0741979311456635 I512 -V522 -0.0787646536860311 Q500 -I512 -0.0810163587030353 R502 -S523 -0.0817986362011443 A505 -L528 -0.0834814656537972 F506 -L528 -0.0841466943851805 R501 -D507 -0.0848099973808756 I512 -S523 -0.0848106594166318 R502 -L528 -0.0867808866052222 V509 -S527 -0.0911414401132431 R501 -S523 -0.0924906334653049 F506 -Q524 -0.0927031356184118 Q500 -D508 -0.0928616304514666 V510 -S523 -0.0972510500072556 M499 -S523 -0.0993705759948478 M499 -T519 -0.103119806211126 R501 -S527 -0.103923511972871 I503 -L528 -0.104025336481055 Y496 -Q524 -0.105789234707953 G497 -I503 -0.107319689383887 Q500 -I518 -0.110835334016176 V509 -I518 -0.112230983441573 I518 -I525 -0.112622299021572 V510 -I518 -0.114362000509226 R502 -A520 -0.118414690915079 R502 -Q524 -0.120615244777311 G517 -I525 -0.121587103738844 V510 -T519 -0.128152578787865 L511 -G517 -0.13040302313515 A513 -I521 -0.132690051997347 I518 -L526 -0.139405556576659 I518 -Q524 -0.13942839436232 L511 -T519 -0.141357983298445 Q500 -A520 -0.14238210511908 G515 -V522 -0.145180284386607 A505 -L526 -0.147148409346198 F506 -I525 -0.148673499050576 R502 -L511 -0.153793158216289 Y496 -S523 -0.153831475120802 I512 -T519 -0.155189050130122 A513 -A520 -0.163289471488296 A520 -I525 -0.163867817435154 R501 -I512 -0.165838420770787 E504 -V510 -0.167356351043775 R502 -D508 -0.17270673361388 G517 -V522 -0.173049209352429 G514 -T519 -0.177854149290814 L511 -S527 -0.190684713188363 G494 -M499 -0.193650134483286 I521 -L526 -0.194999639350833 I521 -S527 -0.197229122663346 M499 -E504 -0.198433957880148 L511 -V522 -0.19859686334296 V509 -I521 -0.201396938983057 S523 -L528 -0.202564921704896 R501 -A520 -0.220438370748423 I512 -A520 -0.221615673745987 Q500 -I521 -0.223605645993967 T519 -I525 -0.223701796237996 A520 -L526 -0.230811069386316 E504 -V509 -0.245027698790919 G514 -I521 -0.260654533775341 S516 -V522 -0.268994208321628 I512 -I521 -0.279679635406538 V522 -L528 -0.291844299985591 S516 -I521 -0.323367756548864 I521 -L528 -0.333981518227313 A513 -T519 -0.362136961257853 V509 -Q524 -0.368742646838857 L511 -I525 -0.418204646059424 V510 -I521 -0.46680796951621