[Fri Aug 26 17:00:35 2016] >Input file: TME5RGT2M1D.pdb >TM segments: 78-91_ 96-107_ 118-127 MAIDEN score = 5.6893 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L90 -N97 10 E88 -I98 0.649802841641534 L90 -I98 0.611821828419036 P83 -G101 0.569903346600346 P83 -H102 0.550723383149024 G84 -V99 0.45558561353591 N97 -K126 0.433574139084277 I81 -R103 0.419680083004168 V99 -D125 0.326763059225477 R104 -N118 0.317684305388877 G85 -G105 0.302583418181638 G105 -A119 0.266003724274161 W100 -G105 0.259481383913562 A80 -G85 0.244622969186961 G101 -Q121 0.234953403251139 P83 -E88 0.220868269154787 R87 -D125 0.216095664103052 G84 -F106 0.210686194940042 G84 -N97 0.210400876881145 P83 -Q121 0.20365991706734 F106 -V120 0.202419196491883 R103 -N118 0.197963652075602 V86 -H102 0.195588028973424 R87 -H127 0.189657505952149 P83 -F106 0.188707323405985 V99 -H127 0.185901546910854 N97 -D125 0.185272677391369 V99 -L123 0.183086497214249 L90 -K126 0.181825630890877 S82 -G105 0.177229204074083 V86 -H127 0.175581373566236 I91 -Y96 0.162419646742829 A89 -G101 0.161636831452177 I98 -H127 0.157562904618858 R103 -A122 0.148975066254454 H102 -A119 0.147837297654223 A89 -I124 0.146054280551867 G84 -H102 0.145053011650014 G84 -G105 0.144637645258027 A122 -H127 0.142740632284364 S82 -V99 0.140947757604057 V99 -V120 0.140064858110911 Y96 -D125 0.140033243870283 H102 -A122 0.135888707414459 A80 -R103 0.135000939747545 H102 -Q121 0.131672263339871 A89 -D125 0.12896001766765 A107 -A119 0.128900855616763 E88 -W100 0.128544258761637 L78 -V120 0.126931864207986 I98 -A122 0.12296690682174 R87 -W100 0.120657414729039 N97 -I124 0.116830475437176 R87 -K126 0.110572612748831 G84 -A122 0.107883668357051 G84 -I124 0.105564386652992 I98 -I124 0.104918442065198 F106 -Q121 0.104548672147149 G101 -F106 0.103439205651813 S82 -V120 0.100637172227758 P83 -A122 0.100425071470032 G84 -A89 0.0987616899585202 P83 -W100 0.0971277959625017 L90 -D125 0.0914572381600651 A89 -L123 0.0887148917525042 R87 -L123 0.0824463754601221 A89 -I98 0.0818868722739325 E88 -G101 0.0779309793809657 Y96 -H127 0.0753627731147219 S82 -N97 0.0745707954775154 P83 -V120 0.0739468980408917 S82 -A107 0.0735203392642343 L79 -A107 0.0725769291996299 G85 -I98 0.0702123375155699 L78 -F106 0.0652495379640938 G84 -A107 0.0632237212274889 V99 -Q121 0.0619805817885303 V86 -N97 0.0588415978322581 A80 -A107 0.0572414429520365 A80 -N118 0.056552827014912 E88 -H102 0.055374157231493 V99 -R104 0.0529504632000193 S82 -D125 0.0527420823973765 L79 -Q121 0.0520028336787641 L78 -A122 0.0510635874535086 P83 -A119 0.0505984399570742 I91 -H127 0.0486655726530286 G84 -H127 0.0470095869762173 V86 -I91 0.0425872827882854 L78 -Q121 0.042552308655659 I91 -I98 0.0410895212746638 R104 -V120 0.0367058015899382 I91 -V99 0.0333592676425152 V86 -I124 0.0305504372283734 I81 -G101 0.0264642624995006 A80 -L123 0.025292468808344 V86 -L123 0.0247520033880759 I81 -W100 0.0241583242714187 R87 -H102 0.0241191652432424 I81 -G105 0.0228352132685224 G84 -L123 0.022521248458018 G84 -Q121 0.0216908410370618 W100 -I124 0.0200185949453 S82 -R87 0.0198227857369404 S82 -K126 0.0182697412284569 G84 -L90 0.0179758414887452 S82 -A119 0.0177741062139596 R104 -Q121 0.0167321036300327 Y96 -K126 0.0126077838501077 G101 -A122 0.0125793567654311 V99 -K126 0.0115673814177315 L79 -G105 0.0109577719923131 G85 -R103 0.00948056590862206 I98 -K126 0.00708409524569742 S82 -E88 0.00639332687774119 I81 -A107 0.00480817602381772 R104 -A119 0.00267700459555975 S82 -H127 0.00217863203430757 G101 -A119 0.00111943941097259 L79 -F106 0.00109661374143855 R103 -L123 0.000493828404922958 G84 -D125 -0.000261124187069917 A80 -G105 -0.00129292079475896 I81 -E88 -0.00162746394318614 L79 -R103 -0.00202125176047918 A80 -I124 -0.00405706072861856 I91 -N97 -0.00441754484039647 R87 -V99 -0.00518524885368254 G105 -Q121 -0.00790396221044221 P83 -I124 -0.00890011646111688 I98 -D125 -0.0117987263779473 P83 -I98 -0.0139181119864058 V99 -G105 -0.0174525901843818 F106 -A122 -0.0199406534796713 G84 -R104 -0.0203017657719475 V99 -A122 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-0.0681870111305432 E88 -A122 -0.0706134498275701 L79 -A122 -0.0723721540035411 G85 -I124 -0.0733039330981375 S82 -I98 -0.0753004396059875 S82 -Q121 -0.0774788455680042 F106 -N118 -0.0782667716739609 S82 -A122 -0.0796131632191344 G105 -N118 -0.0801842789541789 R87 -Y96 -0.0812312370728012 L90 -H127 -0.0819534037291292 P83 -G105 -0.0825208978639513 E88 -V99 -0.0850699726724882 S82 -W100 -0.0890239200166214 G84 -R103 -0.0916086433960475 E88 -D125 -0.0925594068067174 I81 -L123 -0.0926024592794988 I98 -Q121 -0.0930622322066674 S82 -F106 -0.0981243682965448 G105 -V120 -0.0982599957023211 G101 -V120 -0.100376134397824 L90 -W100 -0.100723878538782 A80 -F106 -0.103410649154749 I81 -V99 -0.103828738293526 L79 -G85 -0.105231808375042 A107 -N118 -0.10678009037224 S82 -R103 -0.107260711701345 R103 -V120 -0.112381692812511 V99 -F106 -0.117624756645826 L78 -A107 -0.119391457517066 W100 -V120 -0.120466062919445 G84 -W100 -0.121007277642885 W100 -D125 -0.121651324008595 W100 -A107 -0.12199423145505 I91 -W100 -0.124613019188443 R87 -I124 -0.127252968812241 E88 -N97 -0.129871370720365 L79 -N118 -0.137734554069352 R103 -A119 -0.137801133653668 S82 -G101 -0.140873967835629 G85 -V99 -0.145773282130992 R103 -Q121 -0.149139348158474 I81 -V120 -0.149333070141648 A89 -Y96 -0.150940109668145 A80 -R87 -0.154096634984302 A107 -V120 -0.157112341356165 A80 -H102 -0.157782457039455 S82 -I124 -0.159508861650305 L90 -Y96 -0.161245401041969 R87 -N97 -0.16271823300296 V99 -I124 -0.163151066972707 A80 -A122 -0.167435571555671 I98 -R103 -0.169784934408208 G85 -R104 -0.1702274343454 A80 -Q121 -0.170583866487628 I81 -F106 -0.170714661160307 P83 -N97 -0.172358162861614 E88 -I124 -0.174934612866299 I81 -V86 -0.180547980354165 V86 -I98 -0.183519291513392 W100 -F106 -0.191179813673662 G84 -I98 -0.191570261288617 F106 -A119 -0.195896590886619 E88 -Y96 -0.196715598300937 A80 -V120 -0.199161159593132 I81 -A119 -0.207093973463882 V86 -K126 -0.208875558599928 L78 -A119 -0.21335330884676 S82 -L123 -0.2143643058051 V86 -R103 -0.22164414474496 I81 -I124 -0.223856316221463 G85 -W100 -0.226152058125684 A89 -N97 -0.227613038955051 I81 -H102 -0.235413803992923 E88 -H127 -0.236804753464583 G84 -G101 -0.241031024021808 A80 -A119 -0.241292126742446 I81 -Q121 -0.24164475870595 G85 -H102 -0.251986335348638 L78 -N118 -0.25348476711297 V86 -W100 -0.264910720302098 V86 -D125 -0.267733812595321 N97 -H127 -0.271006409706738 P83 -V99 -0.275505088682236 I98 -L123 -0.279038924840957 H102 -V120 -0.281052103515604 I81 -A122 -0.283648509205131 S82 -H102 -0.283981043784613 L79 -A119 -0.287760275051908 L79 -V120 -0.291679380527519 R87 -I98 -0.298433555561903 W100 -L123 -0.303081842367681 V86 -V99 -0.341793032624959 L90 -V99 -0.404844025686455 A89 -H127 -0.477940884153593 P83 -R104 -0.479515507513101 H102 -A107 -0.481490504002454 P83 -R103 -0.598506105728716