[Mon Aug 29 17:10:55 2016] >Input file: TME5S7P1M2G.pdb >TM segments: 158-180_ 251-265_ 315-330 MAIDEN score = -10.1086 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W165 -L170 0.737897079966931 F173 -F178 0.559237818601971 G172 -V177 0.51622220695721 L169 -I174 0.478667381579613 I171 -P176 0.438454518345094 V161 -V166 0.327746097373715 F323 -A328 0.30392117028919 C164 -F173 0.298762312995834 S168 -G175 0.297372003093921 L170 -G175 0.229154359102017 L321 -P329 0.227352075974927 S159 -A167 0.212129810622541 S159 -S168 0.200011976972915 P263 -L316 0.147600390872126 I160 -L169 0.139859274916505 S168 -V177 0.134754969930517 M251 -A256 0.132478086820596 L315 -M324 0.130898287600817 A167 -G175 0.124279913527902 Q158 -C164 0.122361202846927 I160 -A167 0.120277620031465 V166 -G175 0.113110998364109 V166 -V177 0.107907316592767 I160 -W165 0.107427945554019 A162 -F173 0.102595465026723 G172 -V179 0.102267496857264 L315 -L325 0.0988026425375543 I319 -W327 0.0979923446476043 L260 -E265 0.0909566189977918 S168 -P176 0.0891073513455449 S259 -D264 0.0826241295972814 A162 -G172 0.0820285908597693 V161 -L170 0.0755203762586318 R257 -E262 0.0747786446731271 W165 -F173 0.0747056757572766 A167 -V177 0.0734198781560496 F323 -K330 0.0660254661650186 F258 -P263 0.0656340016582432 L320 -P329 0.0624800584152858 V322 -K330 0.058178769164746 S259 -E265 0.05781123578035 S318 -C326 0.0564368741724808 W165 -G175 0.0561944792750582 P263 -I317 0.0556725361385464 L325 -K330 0.0546812242994639 I317 -F323 0.0473279279806063 A255 -A261 0.0460455223147971 A255 -L260 0.044333762715171 V322 -W327 0.0421944092405382 L320 -A328 0.0385748438071079 F173 -T180 0.0364960867048882 A162 -I171 0.0351365525887255 L260 -I317 0.0295831295378273 L170 -F178 0.0284463729717137 H252 -S259 0.0282665171601018 Q158 -S168 0.0272363223477248 I171 -V179 0.0217175288457543 G175 -T180 0.0204243286253187 V161 -L169 0.0183530264864853 L316 -L325 0.0176001515694004 L170 -V179 0.0173395091488038 F254 -S259 0.00747018068932892 L315 -F323 0.00287426064814955 A256 -A261 0.00271114567962183 S159 -L169 -0.00126918378219876 Q158 -A167 -0.00659034213358489 C164 -G172 -0.00664973488570642 C164 -I171 -0.00701494374199108 A162 -S168 -0.00978098516788606 F254 -L260 -0.0128299776100027 F258 -E265 -0.0154425094863981 A167 -P176 -0.0154920567214334 I174 -T180 -0.0155895130660877 I319 -A328 -0.0159068853668463 V322 -P329 -0.0173088983877112 V166 -I171 -0.0204824461787076 I171 -F178 -0.022974496289454 A162 -A167 -0.0305852250694043 I160 -S168 -0.0320532850690864 L316 -M324 -0.0359311687396096 E262 -I317 -0.0424456421593487 L315 -L320 -0.0439204594263352 A162 -L170 -0.0459147567721532 Q158 -V166 -0.0530004570447042 F323 -P329 -0.0574357792143114 V161 -I171 -0.0641844673712164 D264 -I317 -0.0683877161684581 E253 -S259 -0.0706048305168192 E253 -L260 -0.0724619796017553 V166 -P176 -0.0726568760543759 F254 -A261 -0.0846750781657359 S318 -W327 -0.0847555298797977 H252 -R257 -0.0877008605747711 I163 -S168 -0.0877641090209806 E253 -A261 -0.0911734410208862 Q158 -L169 -0.0958783335677822 C164 -L169 -0.0960338790540867 L169 -F178 -0.0984095929529136 I163 -G172 -0.102937108023976 M324 -K330 -0.103475654143237 Q158 -W165 -0.112224492725318 A162 -L169 -0.115935873055186 V166 -I174 -0.125137542634899 L320 -W327 -0.130292353030375 F258 -D264 -0.134703427257201 P263 -L315 -0.137606103604492 D264 -L316 -0.138531238357911 I171 -V177 -0.140634600541709 W165 -I174 -0.143560383625899 L170 -P176 -0.144249840316261 S318 -F323 -0.147171452098811 A167 -F173 -0.147913358576016 I317 -L325 -0.158398536514058 E262 -L316 -0.160007239418147 L316 -F323 -0.175265065983851 G172 -F178 -0.178488382329296 W165 -G172 -0.178834376800343 S318 -M324 -0.192505556526899 L169 -V177 -0.192922910363706 A167 -I174 -0.200834155066984 M324 -P329 -0.201498098636339 M251 -R257 -0.203405259524922 V166 -G172 -0.209883400634774 S168 -F173 -0.21097023809855 H252 -F258 -0.214433297807213 S159 -W165 -0.21486991193353 S318 -L325 -0.220670715000862 I317 -M324 -0.22942360381992 I319 -L325 -0.236044333696375 S159 -C164 -0.241392602092894 I163 -I171 -0.241796241495846 L316 -L321 -0.242597480358322 S159 -V166 -0.250384990478428 W165 -I171 -0.263284671910407 I317 -C326 -0.272030602422694 L315 -L321 -0.275529506865878 L321 -A328 -0.276755860863103 I319 -C326 -0.278860999742293 L321 -C326 -0.280865002977536 S168 -I174 -0.282781855359894 I163 -L170 -0.286534691357189 L169 -G175 -0.303121132256307 L320 -L325 -0.321394351449806 L315 -V322 -0.321414361534156 V161 -S168 -0.329532043933803 I160 -V166 -0.331870402501828 L321 -W327 -0.33728694159597 Q158 -I163 -0.340325526692858 V322 -A328 -0.344160831390064 F173 -V179 -0.360745807245166 L316 -V322 -0.365798272129944 I319 -M324 -0.369044632221327 V161 -A167 -0.3707374779219 I317 -V322 -0.371209984576085 V166 -F173 -0.371753874723486 I163 -L169 -0.376587175690942 I174 -V179 -0.387443577964376 L170 -V177 -0.40670527230762 L320 -C326 -0.454651817606217 A167 -G172 -0.456025690841038 E253 -F258 -0.460697240952222 C164 -L170 -0.478846475250551 L169 -P176 -0.568198534802597